Relatively little is known about the molecular pathways defining the epithelial progenitor cells of the embryonic and adult lung and their role in lung development, steady state homeostasis and repair after damage caused by environmental and other agents. In this competitive renewal we will build on previous discoveries to obtain new information about basic mechanisms controlling the specification, proliferation, and differentiation of lung epithelial progenitor/stem cells, using the mouse as a model genetic organism.
In Aim 1 we will test the hypothesis that the developmental potential of epithelial progenitor cells in the distal tips of the embryonic lung changes in an orderly way over time so that early born descendants give rise to cells in the proximal airways while late born daughters give rise to alveolar cells. For this aim we have already generated two new lines of genetically engineered mice, Id2-GFP and Id2-CreER. These will enable us to follow the developmental fate of distal tip cells in vivo, isolate the cells at different times using flow cytometry, analyze their transcriptome using gene arrays, and test the role of candidate regulatory genes using gain and loss of function experiments.
In Aim 2 we will focus on the adult trachea and main bronchi which has a pseudostratified epithelium, as in a large proportion of the human airways. We will test the relative contribution of basal stem cells and secretory (Clara) cells in maintaining this region and in repairing it after injury by exposure to naphthalene or sulfur dioxide. This will be achieved using new K5-CreEr and Scgb1a1-CreEr alleles for fate mapping and gene manipulation. We will also elucidate basic mechanisms regulating the specification, self-renewal and differentiation of basal stem cells, focusing initially on the role of the transcription factor, Sox2. Finally, in a high risk Aim 3, we will test the hypothesis that small non-coding RNAs known as microRNAs can reversibly enhance the self-renewal potential of progenitor cells in the adult lung, either in the steady state or during repair. To do this we will initially inducibly express in basal and Clara cells the miR17-92 gene that encodes a conserved cluster of six microRNAs. We have already shown that this cluster enhances the proliferation of epithelial progenitors in the embryonic lung at the expense of their differentiation and we will now test this in adult progenitors. We will then test the activity of individual miR17-92 members or combinations of them. In the long term we will ask whether this activity can be obtained by direct application of double stranded small RNAs linked to cell-specific aptamers. PROJECT NARRATIVE. This work will increase our understanding of basic mechanisms regulating the embryonic development of the lung and the ability of the epithelial cells to undergo repair in the adult. In the long term the work may lead to potential therapies or predictive assays for pathological conditions related to defects in the supply, proliferation or differentiation of progenitor/stem cells in the human lung.

National Institute of Health (NIH)
National Heart, Lung, and Blood Institute (NHLBI)
Method to Extend Research in Time (MERIT) Award (R37)
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Lung Injury, Repair, and Remodeling Study Section (LIRR)
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Lin, Sara
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Duke University
Anatomy/Cell Biology
Schools of Medicine
United States
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Wansleeben, Carolien; Bowie, Emily; Hotten, Danielle F et al. (2014) Age-related changes in the cellular composition and epithelial organization of the mouse trachea. PLoS One 9:e93496
Barkauskas, Christina E; Cronce, Michael J; Rackley, Craig R et al. (2013) Type 2 alveolar cells are stem cells in adult lung. J Clin Invest 123:3025-36
Rock, Jason R; Hogan, Brigid L M (2011) Epithelial progenitor cells in lung development, maintenance, repair, and disease. Annu Rev Cell Dev Biol 27:493-512
Rock, Jason R; Barkauskas, Christina E; Cronce, Michael J et al. (2011) Multiple stromal populations contribute to pulmonary fibrosis without evidence for epithelial to mesenchymal transition. Proc Natl Acad Sci U S A 108:E1475-83
Jovov, Biljana; Que, Jianwen; Tobey, Nelia A et al. (2011) Role of E-cadherin in the pathogenesis of gastroesophageal reflux disease. Am J Gastroenterol 106:1039-47
Rock, Jason R; Gao, Xia; Xue, Yan et al. (2011) Notch-dependent differentiation of adult airway basal stem cells. Cell Stem Cell 8:639-48
Rock, Jason R; Randell, Scott H; Hogan, Brigid L M (2010) Airway basal stem cells: a perspective on their roles in epithelial homeostasis and remodeling. Dis Model Mech 3:545-56
Morrisey, Edward E; Hogan, Brigid L M (2010) Preparing for the first breath: genetic and cellular mechanisms in lung development. Dev Cell 18:8-23
Rock, Jason R; Hogan, Brigid L M (2010) Developmental biology. Branching takes nerve. Science 329:1610-1
Lu, Yun; Futtner, Christopher; Rock, Jason R et al. (2010) Evidence that SOX2 overexpression is oncogenic in the lung. PLoS One 5:e11022

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