Nectome will create technologies to enable whole-brain nanoscale preservation and imaging, a vital step towards a deep understanding of the mind and of the brain's diseases. Current brain-processing technologies compromise between whole-brain applicability or nanoscale resolution; our technologies will achieve both si- multaneously. Similar to the way that next-generation genetic sequencing has helped to unlock the potential of genomics, these technologies will provide a foundation and set the path for the next generation of brain imag- ing. We will modify the two most promising nanoscale brain preparation techniques, expansion microscopy (1) and plastic embedding (2), to use vascular perfusion (3) instead of diffusion. This will enable them to overcome their current thickness limit of 150 microns in order to scale to whole brain samples. We will also integrate both methods with aldehyde-stabilized cryopreservation (ASC), a powerful brain-banking technique which can durably preserve the nanoscale structure of whole brains for centuries with no decay (4). Electron microscopy (EM) has been used for over 50 years to analyze brain tissue and is considered the ?gold standard? for nanoscale brain imaging. Expansion microscopy (ExM) is a very recently developed brain imaging technique that physically expands brain tissue to 10?20 times its original size, enabling nanoscale resolution of brain tissue with normal light microscopes and with ?uorescent labels to detect a diverse array of molecules normally invisible with electron microscopy. Whole-brain adaptations of EM and ExM will be of great interest to pharmaceutical companies wishing to evaluate the effects of drugs on brain ultrastructure and seeking to avoid wasting large amounts of brain tissue as is currently done in many studies. We also see immense application in the burgeoning ?eld of Connectomics (the study of the brain's detailed pattern of connectivity), and in brain banks wishing to store important brain samples with unprecedented detail. We foresee commercial opportunity in offering brain preservation and processing both as a service for processing whole brains, and as a kit for researchers who wish to accomplish this nanoscale preservation and imaging in their own labs.

Public Health Relevance

We will create technologies to enable whole-brain nanoscale imaging and preservation. These technologies for whole-brain analysis are a vital step towards deep understanding of the mind and of many brain diseases ? they promise to do for neuroscience what whole-genome analysis has done for biology.

Agency
National Institute of Health (NIH)
Institute
National Institute of Mental Health (NIMH)
Type
Small Business Technology Transfer (STTR) Grants - Phase I (R41)
Project #
3R41MH112318-01S1
Application #
9392273
Study Section
Special Emphasis Panel (ZRG1)
Program Officer
Grabb, Margaret C
Project Start
2016-09-21
Project End
2017-08-31
Budget Start
2016-09-21
Budget End
2017-08-31
Support Year
1
Fiscal Year
2017
Total Cost
Indirect Cost
Name
Nectome, Inc.
Department
Type
DUNS #
080108651
City
Oakland
State
CA
Country
United States
Zip Code
94607
Yoon, Young-Gyu; Dai, Peilun; Wohlwend, Jeremy et al. (2017) Feasibility of 3D Reconstruction of Neural Morphology Using Expansion Microscopy and Barcode-Guided Agglomeration. Front Comput Neurosci 11:97