The enclosed proposal represents a competitive renewal of an established graduate training program in Genetics at UC Berkeley. We request funds to support 17 graduate trainees in the areas of Developmental Genetics and Genomics, Cell & Systems Genetics, and Population Genetics and Evolution. Students enter this inter-disciplinary training program after gaining admission into one of four Departments on campus. Two of the Departments, Molecular and Cell Biology (MCB) and Integrative Biology (IB), are located within the College of Letters and Sciences. A third Department, Plant and Microbial Biology (PMB), is located in the College of Natural Resources. Students can also enter the training program through the School of Public Health (SPH). Students are selected into the program based on an interest in one of the broadly defined areas of genetics that are sponsored by this training grant. They are also selected based on merit and future promise as independent investigators. Despite their diverse backgrounds, the training program includes a number of mechanisms to ensure that all of the graduate students obtain rigorous training in genetics. Once they enter the program, students are free to select any one of 41 different faculty mentors located in the four aforementioned performance sites. These faculty employ a variety of genetic and genomic methods to study a broad spectrum of problems in cell, developmental, and evolutionary biology, including metazoan and plant patterning, embryogenesis, sex determination, cell determination and differentiation, morphogenesis, and organogenesis. The study of cellular processes in the areas of signal transduction, DNA replication, transcription, cell trafficking and the cytoskeleton, transcription, and DNA replication are the focus of many faculty. Other faculty use genetic approaches to study evolutionary processes such as the evolution of chordates and patterning in invertebrates. In the first year of the program, trainees complete advanced lecture, laboratory, and seminar courses. Students in PMB and MCB are also required to complete three 10-week laboratory rotations with potential dissertation mentors. All students commence their dissertation research by the beginning of the second year. They are also required to complete an oral qualifying exam that is administered by four faculty from at least two different departments within the training program. All students are required to complete at least two semesters of teaching as graduate instructors during the second and third years of the training program. In addition to formal course offerings in the different areas of genetics, students are expected to participate in a variety of seminar programs, joint lab meetings, journal clubs, and retreats that are sponsored by the Genetics Training Program. ? ?

Agency
National Institute of Health (NIH)
Institute
National Institute of General Medical Sciences (NIGMS)
Type
Institutional National Research Service Award (T32)
Project #
5T32GM007127-34
Application #
7452357
Study Section
National Institute of General Medical Sciences Initial Review Group (BRT)
Program Officer
Poodry, Clifton A
Project Start
1975-07-01
Project End
2010-06-30
Budget Start
2008-07-01
Budget End
2009-06-30
Support Year
34
Fiscal Year
2008
Total Cost
$487,016
Indirect Cost
Name
University of California Berkeley
Department
Biochemistry
Type
Schools of Arts and Sciences
DUNS #
124726725
City
Berkeley
State
CA
Country
United States
Zip Code
94704
Fischer, Monika S; Wu, Vincent W; Lee, Ji E et al. (2018) Regulation of Cell-to-Cell Communication and Cell Wall Integrity by a Network of MAP Kinase Pathways and Transcription Factors in Neurospora crassa. Genetics 209:489-506
Erickson, Priscilla A; Baek, Jiyeon; Hart, James C et al. (2018) Genetic Dissection of a Supergene Implicates Tfap2a in Craniofacial Evolution of Threespine Sticklebacks. Genetics 209:591-605
Malnoë, Alizée; Schultink, Alex; Shahrasbi, Sanya et al. (2018) The Plastid Lipocalin LCNP Is Required for Sustained Photoprotective Energy Dissipation in Arabidopsis. Plant Cell 30:196-208
Huberman, Lori B; Coradetti, Samuel T; Glass, N Louise (2017) Network of nutrient-sensing pathways and a conserved kinase cascade integrate osmolarity and carbon sensing in Neurospora crassa. Proc Natl Acad Sci U S A 114:E8665-E8674
Exner, Cameron R T; Kim, Albert Y; Mardjuki, Sarah M et al. (2017) sall1 and sall4 repress pou5f3 family expression to allow neural patterning, differentiation, and morphogenesis in Xenopus laevis. Dev Biol 425:33-43
Erickson, Priscilla A; Ellis, Nicholas A; Miller, Craig T (2016) Microinjection for Transgenesis and Genome Editing in Threespine Sticklebacks. J Vis Exp :
Cohn, Megan; Morbitzer, Robert; Lahaye, Thomas et al. (2016) Comparison of gene activation by two TAL effectors from Xanthomonas axonopodis pv. manihotis reveals candidate host susceptibility genes in cassava. Mol Plant Pathol 17:875-89
Erickson, Priscilla A; Glazer, Andrew M; Killingbeck, Emily E et al. (2016) Partially repeatable genetic basis of benthic adaptation in threespine sticklebacks. Evolution 70:887-902
Steakley, David Lee; Rine, Jasper (2015) On the Mechanism of Gene Silencing in Saccharomyces cerevisiae. G3 (Bethesda) 5:1751-63
Schultink, Alex; Naylor, Dan; Dama, Murali et al. (2015) The role of the plant-specific ALTERED XYLOGLUCAN9 protein in Arabidopsis cell wall polysaccharide O-acetylation. Plant Physiol 167:1271-83

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