) Wilms tumor represents the most common renal neoplasm of childhood. Remarkable success has been achieved in the therapy of WT through the National Wilms Tumor Study Group (NWTS). Despite the responsiveness of most WT to adjuvant chemotherapy, some tumors are unresponsive and result in tumor progression and death. Most tumors lack distinctive histologic or clinical features to enable targeting with more or less aggressive chemotherapy. Recognizing biologically distinctive subsets of WT may be useful for predicting clinical behavior and targeting therapy. The goal of this project is to identify molecular categories of WT that have predictable clinical properties, including propensity to metastasize and response to therapy. We hypothesize that gene expression profiles will aid in the recognition of these categories.
AIM ONE : To identify candidate marker genes that are differentially expressed: Using commercially available cDNA macro-arrays, we will comprehensively analyze gene expression in a small group of Wilms tumors. A subset of genes whose expression varies throughout these tumors will be identified.
AIM TWO : To identify molecular categories of Wilms tumor based upon the expression of candidate marker genes identified in Aim One: Utilizing custom cDNA microarrays approximately 200-300 pathologically, clinically and genetically characterized WT will be analyzed. Using computationally assisted methods, profiles of gene expression that define molecular categories of Wilms tumors will be identified.
AIM THREE : To verify, test, and model the new molecular categories of Wilms tumor and to examine these new categories in their clinical, pathologic, and genetic context. Each molecular category will be analyzed and validated for clinical, pathologic and genetic features using the extensive resources of the NWTS. Genes predictive of molecular categories will be verified using in situ hybridization or immunohistochemistry. A model categorization will be proposed and tested on 200 additional Wilms tumors.

Agency
National Institute of Health (NIH)
Institute
National Cancer Institute (NCI)
Type
Research Project--Cooperative Agreements (U01)
Project #
5U01CA088131-06
Application #
7017074
Study Section
Special Emphasis Panel (ZCA1-SRRB-7 (M1))
Program Officer
Lively, Tracy (LUGO)
Project Start
2001-04-18
Project End
2008-11-30
Budget Start
2005-12-01
Budget End
2008-11-30
Support Year
6
Fiscal Year
2006
Total Cost
$327,659
Indirect Cost
Name
Children's Memorial Hospital (Chicago)
Department
Type
DUNS #
074438755
City
Chicago
State
IL
Country
United States
Zip Code
60611
Gadd, Samantha; Huff, Vicki; Walz, Amy L et al. (2017) A Children's Oncology Group and TARGET initiative exploring the genetic landscape of Wilms tumor. Nat Genet 49:1487-1494
Ooms, Ariadne H A G; Gadd, Samantha; Gerhard, Daniela S et al. (2016) Significance of TP53 Mutation in Wilms Tumors with Diffuse Anaplasia: A Report from the Children's Oncology Group. Clin Cancer Res 22:5582-5591
Gooskens, Saskia L; Gadd, Samantha; Guidry Auvil, Jaime M et al. (2015) TCF21 hypermethylation in genetically quiescent clear cell sarcoma of the kidney. Oncotarget 6:15828-41
Perlman, Elizabeth J; Gadd, Samantha; Arold, Stefan T et al. (2015) MLLT1 YEATS domain mutations in clinically distinctive Favourable Histology Wilms tumours. Nat Commun 6:10013
Walz, Amy L; Ooms, Ariadne; Gadd, Samantha et al. (2015) Recurrent DGCR8, DROSHA, and SIX homeodomain mutations in favorable histology Wilms tumors. Cancer Cell 27:286-97
Gadd, Samantha; Huff, Vicki; Huang, Chiang-Ching et al. (2012) Clinically relevant subsets identified by gene expression patterns support a revised ontogenic model of Wilms tumor: a Children's Oncology Group Study. Neoplasia 14:742-56
Sredni, Simone T; Gadd, Samantha; Huang, Chiang-Ching et al. (2009) Subsets of very low risk Wilms tumor show distinctive gene expression, histologic, and clinical features. Clin Cancer Res 15:6800-9
Huang, Chiang-Ching; Gadd, Samantha; Breslow, Norman et al. (2009) Predicting relapse in favorable histology Wilms tumor using gene expression analysis: a report from the Renal Tumor Committee of the Children's Oncology Group. Clin Cancer Res 15:1770-8
Huang, Chiang-Ching; Cutcliffe, Colleen; Coffin, Cheryl et al. (2006) Classification of malignant pediatric renal tumors by gene expression. Pediatr Blood Cancer 46:728-38
Cutcliffe, Colleen; Kersey, Donna; Huang, Chiang-Ching et al. (2005) Clear cell sarcoma of the kidney: up-regulation of neural markers with activation of the sonic hedgehog and Akt pathways. Clin Cancer Res 11:7986-94