In this application, we propose to integrate our research in functional genomics and craniofacial morphology/dysmorphology within the FaceBase Consortium. Specifically, we will focus on the development of the mandible and maxilla. Congenital malformations involving these facial bones significantly impact quality of life because our face is our identity. For example, mandibular dysmorphogenesis ranging from agenesis of the jaw to micrognathia is a common malformation and appears in multiple syndromes. Micrognathia not only presents as a facial deformity but can also cause cleft palate and airway obstruction, such as in Pierre-Robin sequence. The maxilla contributes to mid-facial formation. Maxillary hypoplasia is often associated with cleft palate and has been described in more than sixty different syndromes. Despite their importance, the mechanisms that regulate facial bone development are relatively uncharacterized. This is a significant gap in our knowledge and an important opportunity to generate invaluable resources for the research community. The proposed work is a logical progression from our current spoke project within the FaceBase Consortium on palatal development. Over the past five years, we have deposited nearly 200 hard and soft tissue scans and 125 microarray gene expression datasets in the FaceBase hub. These datasets have demonstrated their utility, as shown by other researchers' presentations at major international conferences and publications. Equally importantly, our team has played a significant role in the FaceBase Consortium, the hub website design, data organization and presentation. Building on our experience and in alignment with RFA-DE-14-004, we propose to investigate facial bone development and malformations.
In Specific Aim 1, we will perform global and specific gene expression profiling analysis of mandible development, and will integrate these datasets with cell lineage and quantitative 3D dynamic imaging analyses. In collaboration with the ontology group within the FaceBase consortium, we will define anatomical landmarks and morphometric parameters of the developing mandible.
In Specific Aim 2, we will expand our gene expression profile analyses in the developing maxilla. We will correlate this information with 3D imaging of the maxilla and define anatomical landmarks and parameters in collaboration with the ontology group within the FaceBase consortium. Our data will facilitate the investigation of the molecular regulatory mechanism of facial bone formation.
In Specific Aim 3, using the data generated here, we will investigate the role of the TGF? and Msx1 signaling network in regulating mandible development and test how manipulation of TGF? downstream target genes can prevent and rescue mandible defects in mutant animal models. This study will showcase how our datasets at the hub can facilitate the generation of hypothesis-driven research and collaborations. Because of the prevalence of facial bone defects in orofacial clefting patients and the lack of quantitative studies in this are, our proposed study will fill a void and provide a significant resource for the research community.

Public Health Relevance

Congenital malformations involving the facial bones significantly impact quality of life because our face is our identity, but little is known about ho the molecular mechanisms that regulate the normal and abnormal development of these bones. We will study the development of the mandible and maxilla through gene expression profiling and quantitative 3D dynamic imaging analyses, as well as test how manipulating specific genes can prevent and rescue mandible defects. Our study will generate important resources for the research community, inform clinical diagnosis and provide potential approaches to prevent or rescue craniofacial malformations.

Agency
National Institute of Health (NIH)
Institute
National Institute of Dental & Craniofacial Research (NIDCR)
Type
Research Project--Cooperative Agreements (U01)
Project #
5U01DE024421-03
Application #
9043025
Study Section
Special Emphasis Panel (ZDE1)
Program Officer
Scholnick, Steven
Project Start
2014-05-12
Project End
2019-04-30
Budget Start
2016-05-01
Budget End
2017-04-30
Support Year
3
Fiscal Year
2016
Total Cost
Indirect Cost
Name
University of Southern California
Department
Dentistry
Type
Schools of Dentistry/Oral Hygn
DUNS #
072933393
City
Los Angeles
State
CA
Country
United States
Zip Code
90032
Li, Jingyuan; Yuan, Yuan; He, Jinzhi et al. (2018) Constitutive activation of hedgehog signaling adversely affects epithelial cell fate during palatal fusion. Dev Biol 441:191-203
Tian, Hua; Feng, Jifan; Li, Jingyuan et al. (2017) Intraflagellar transport 88 (IFT88) is crucial for craniofacial development in mice and is a candidate gene for human cleft lip and palate. Hum Mol Genet 26:860-872
Sugii, Hideki; Grimaldi, Alexandre; Li, Jingyuan et al. (2017) The Dlx5-FGF10 signaling cascade controls cranial neural crest and myoblast interaction during oropharyngeal patterning and development. Development 144:4037-4045
Brinkley, James F; Fisher, Shannon; Harris, Matthew P et al. (2016) The FaceBase Consortium: a comprehensive resource for craniofacial researchers. Development 143:2677-88
Liu, Yang; Feng, Jifan; Li, Jingyuan et al. (2015) An Nfic-hedgehog signaling cascade regulates tooth root development. Development 142:3374-82
Zhao, Hu; Feng, Jifan; Ho, Thach-Vu et al. (2015) The suture provides a niche for mesenchymal stem cells of craniofacial bones. Nat Cell Biol 17:386-96
Ho, Thach-Vu; Iwata, Junichi; Ho, Hoang Anh et al. (2015) Integration of comprehensive 3D microCT and signaling analysis reveals differential regulatory mechanisms of craniofacial bone development. Dev Biol 400:180-90
Li, Jingyuan; Feng, Jifan; Liu, Yang et al. (2015) BMP-SHH signaling network controls epithelial stem cell fate via regulation of its niche in the developing tooth. Dev Cell 33:125-35
Grimaldi, Alexandre; Parada, Carolina; Chai, Yang (2015) A Comprehensive Study of Soft Palate Development in Mice. PLoS One 10:e0145018
Zhao, H; Chai, Y (2015) Stem Cells in Teeth and Craniofacial Bones. J Dent Res 94:1495-501

Showing the most recent 10 out of 11 publications