As requested by RFA-HD-04-002 entitled """"""""Genomic and Proteomic Network for Premature Birth Research,"""""""" we propose to establish a Data Management, Statistics, and Informatics Core at Yale University as a part of the Network. We will be responsible for the central database, data analysis, and management;information technology;and coordination of the administrative activities of the Network. We have assembled a team of investigators with extensive experience in all of these areas, and we have collaborated closely and successfully in related activities. Specifically, as a part of the Network, we will (1) establish and maintain a central database, data analysis, information technology;(2) collaborate with investigators in the three clinical cores to define the study hypotheses and play a leadership role in the study design;(3) interact with investigators in the analytic core for analyzing genomic and proteomic data;(4) establish and maintain a public, web-based, genomic and proteomic database for data mining and data deposition by the research community as well as within our network;(5) participate in the steering committee of the network, coordinate and administrate activities central to the network and communicate regularly with the NICHD program staff and the network investigators;(6) participate in manuscript preparation and publication with the network investigators, and disseminate scientific results timely through the network website;(7) initiate our own research activities consistent with the goal of the RFA, namely to hasten a deeper understanding of the patho-physiology of premature birth, discover novel target molecules and diagnostic biomarkers, and ultimately aid in formulating more effective interventions to prevent premature birth.

Agency
National Institute of Health (NIH)
Institute
Eunice Kennedy Shriver National Institute of Child Health & Human Development (NICHD)
Type
Research Project--Cooperative Agreements (U01)
Project #
5U01HD050062-05
Application #
7602981
Study Section
Special Emphasis Panel (ZHD1-DSR-T (02))
Program Officer
Spong, Catherine
Project Start
2005-09-30
Project End
2011-03-31
Budget Start
2009-04-01
Budget End
2010-03-31
Support Year
5
Fiscal Year
2009
Total Cost
$917,691
Indirect Cost
Name
Yale University
Department
Public Health & Prev Medicine
Type
Schools of Medicine
DUNS #
043207562
City
New Haven
State
CT
Country
United States
Zip Code
06520
Manuck, Tracy A; Esplin, M Sean; Biggio, Joseph et al. (2016) Predictors of response to 17-alpha hydroxyprogesterone caproate for prevention of recurrent spontaneous preterm birth. Am J Obstet Gynecol 214:376.e1-8
Esplin, M Sean; Manuck, Tracy A; Varner, Michael W et al. (2015) Cluster analysis of spontaneous preterm birth phenotypes identifies potential associations among preterm birth mechanisms. Am J Obstet Gynecol 213:429.e1-9
Manuck, Tracy A; Barbour, Kelli; Janicki, Lindsay et al. (2015) Conversion of Society for Maternal-Fetal Medicine abstract presentations to manuscript publications. Am J Obstet Gynecol 213:405.e1-6
Zhang, Heping; Baldwin, Don A; Bukowski, Radek K et al. (2015) A genome-wide association study of early spontaneous preterm delivery. Genet Epidemiol 39:217-26
Manuck, Tracy A; Esplin, M Sean; Biggio, Joseph et al. (2015) The phenotype of spontaneous preterm birth: application of a clinical phenotyping tool. Am J Obstet Gynecol 212:487.e1-487.e11
Parry, Samuel; Zhang, Heping; Biggio, Joseph et al. (2014) Maternal serum serpin B7 is associated with early spontaneous preterm birth. Am J Obstet Gynecol 211:678.e1-12
Zhang, Heping; Wang, Minghui (2009) Search for the smallest random forest. Stat Interface 2:381
Chen, Xiang; Liu, Ching-Ti; Zhang, Meizhuo et al. (2007) A forest-based approach to identifying gene and gene gene interactions. Proc Natl Acad Sci U S A 104:19199-203
Zhang, Heping; Liu, Lei; Wang, Xueqin et al. (2007) Guideline for data analysis of genomewide association studies. Cancer Genomics Proteomics 4:27-34