Little is known about Barretts esophagus (BE) in terms of its etiology, although it is most likely caused by the complex interplay between genes and environmental factors and it is known to be a direct precursor to Esophageal cancer (EAC). Therefore, large-scale research projects, such as the ones proposed in this BETRNet Translational Research Center (TRC) application, are necessary to have an impact on early detection, diagnosis and prevention. We will develop a centralized Bioinformatics Core infrastructure to support data management, study design, and statistical/bioinformatic analysis for all proposed projects and to help facilitate data sharing and the capacity to link and share data and biospecimens with the BETRNet Data Coordination Center. This Core will meet the requirements for both this application as a whole, for each individual project within this application and for cross-pollination between this TRC and the other funded TRCs under this RFA, leading to many scientific manuscripts and submission of additional grants and pilot projects. Matching the theme and structure of the components of this multi-institutional TRC proposal, this Bioinformatics Core is drawn from faculty at the Case Comprehensive Cancer Center, the Department of Epidemiology and Biostatistics and the Department of Genetics at the Case Western Reserve University (CWRU) School of Medicine, the Department of Public Health Sciences at the Fred Hutchinson Cancer Research Center at the University of Washington and the Department of Biostatistics at the University of North Carolina School of Medicine.

Agency
National Institute of Health (NIH)
Institute
National Cancer Institute (NCI)
Type
Specialized Center--Cooperative Agreements (U54)
Project #
5U54CA163060-05
Application #
8918509
Study Section
Special Emphasis Panel (ZCA1)
Project Start
Project End
Budget Start
2015-09-01
Budget End
2016-08-31
Support Year
5
Fiscal Year
2015
Total Cost
Indirect Cost
Name
Case Western Reserve University
Department
Type
DUNS #
077758407
City
Cleveland
State
OH
Country
United States
Zip Code
44106
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Codipilly, Don Chamil; Chandar, Apoorva Krishna; Singh, Siddharth et al. (2018) The Effect of Endoscopic Surveillance in Patients With Barrett's Esophagus: A Systematic Review and Meta-analysis. Gastroenterology 154:2068-2086.e5
Evans, Daniel R; Venkitachalam, Srividya; Revoredo, Leslie et al. (2018) Evidence for GALNT12 as a moderate penetrance gene for colorectal cancer. Hum Mutat 39:1092-1101
Chan, M Q; Blum, A E; Chandar, A K et al. (2018) Association of sporadic and familial Barrett's esophagus with breast cancer. Dis Esophagus 31:
Yu, Ming; Maden, Sean K; Stachler, Matthew et al. (2018) Subtypes of Barrett's oesophagus and oesophageal adenocarcinoma based on genome-wide methylation analysis. Gut :
Berger, Nathan A (2018) New light on the pancreatic cyst conundrum. Transl Cancer Res 7:S545-S548
Berger, Nathan A (2018) Young Adult Cancer: Influence of the Obesity Pandemic. Obesity (Silver Spring) 26:641-650
Moinova, Helen R; LaFramboise, Thomas; Lutterbaugh, James D et al. (2018) Identifying DNA methylation biomarkers for non-endoscopic detection of Barrett's esophagus. Sci Transl Med 10:
Stachler, Matthew D; Camarda, Nicholas D; Deitrick, Christopher et al. (2018) Detection of Mutations in Barrett's Esophagus Before Progression to High-Grade Dysplasia or Adenocarcinoma. Gastroenterology 155:156-167
Li, Nan; Petrick, Jessica L; Steck, Susan E et al. (2017) A pooled analysis of dietary sugar/carbohydrate intake and esophageal and gastric cardia adenocarcinoma incidence and survival in the USA. Int J Epidemiol 46:1836-1846

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