The mission of the Administrative Core is to support and promote the scientific and outreach goals of the Cancer Cell Map Initiative (CCMI). Amongst its responsibilities, the Core will perform the following: provide leadership that ensures strong oversight and representation of all stakeholders in decisions? facilitate integrationofresearchprojects?connecttheCCMItothebroaderNCICancerSystemsBiologyConsortium? andmanagethesolicitation,reviewandfundingofpilotprojects.Daytodayactivitieswillbecoordinatedbya crosscampusteamconsistingoftheCCMIDirectors(Dr.NevanKrogan,thecontactPI,andDr.TreyIdeker), the Assistant Director (Dr. Jason Kreisberg) and the Center Administrator (Donna EvenKesef). The entire leadership team, equally split between UCSF and UCSD, has extensive experience leading and managing large research centers. We will also form a Steering Committee consisting of the Directors and CoInvestigators,whichwillevaluatetheprogressandneedsofeachcomponent,reviewandpossiblymodify priorities,andidentifyareasdeservingextrafocus.AnExternalAdvisoryCommittee(EAC)willbeformedto reviewtheCenter?sprogressandfutureplans.TofacilitatecommunicationamongstCentermembersandwith the other members of the Cancer Systems Biology Consortium including the Coordinating Center, the AdministrativeCorewillorganizeandmanageanumberofregularlyscheduledmeetings,somespecificallyfor members of the Steering Committee and others for the entire CCMI. These various meetings will provide ample opportunities to discuss overall research directions and specific experimental concerns. The Core is already organizing a workshop for late September of 2016, which will feature talks by all 10 CCMI faculty membersalongwithtalksfrom12otherfacultymembersfromUCSF,UCSD,Stanford,Harvardandothers.In collaborationwiththeOutreachCoreandtheBioinformaticsCore(Core2),theAdministrativeCorewillassist inthemaintenanceoftheCCMIwebsite(www.ccmi.org)andsharedfileservers.Toprovideformalsitereview andinvolvementwithNCI,theCorewillorganizeanannualEACMeeting,inwhichthePIsandkeypersonnel willmeetwiththeEACandNCIprogramstafftoreviewtheCenter?sactivities.TheEACMeetingwillbeheldin conjunction with an annual Cancer Network Biology Symposium. Finally, the Core will design, solicit and managetheawardprocessforIntracenterPilotProjects.Thisprogramwillprovideresearchersfromoutside the CCMI the opportunity to enhance the Center?s overall research objectives through the shortterm exploration of highly innovative, highrisk concepts. Funding for pilot projects will be supplemented with an additionalcontributionof$100,000,halffromtheChancellorofUCSFandhalffromtheDeanofMedicinefrom UCSD.Overall,theAdministrativeCorewillensurethatprojectsareproductive,synergisticandhavesufficient support?thatresourcesharingobligationsaremet?andthatoutreachactivitiesareofmaximumimpact.

Agency
National Institute of Health (NIH)
Institute
National Cancer Institute (NCI)
Type
Specialized Center--Cooperative Agreements (U54)
Project #
1U54CA209891-01A1
Application #
9351147
Study Section
Special Emphasis Panel (ZCA1-RTRB-R (J2))
Project Start
Project End
Budget Start
2017-04-01
Budget End
2018-03-31
Support Year
1
Fiscal Year
2017
Total Cost
$192,403
Indirect Cost
$47,339
Name
University of California San Francisco
Department
Type
Domestic Higher Education
DUNS #
094878337
City
San Francisco
State
CA
Country
United States
Zip Code
94118
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Shen, John Paul; Ideker, Trey (2018) Synthetic Lethal Networks for Precision Oncology: Promises and Pitfalls. J Mol Biol 430:2900-2912
Wang, Sheng; Ma, Jianzhu; Zhang, Wei et al. (2018) Typing tumors using pathways selected by somatic evolution. Nat Commun 9:4159
Zhang, Wei; Ma, Jianzhu; Ideker, Trey (2018) Classifying tumors by supervised network propagation. Bioinformatics 34:i484-i493
Zhang, Wei; Bojorquez-Gomez, Ana; Velez, Daniel Ortiz et al. (2018) A global transcriptional network connecting noncoding mutations to changes in tumor gene expression. Nat Genet 50:613-620
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Patrick, Kristin L; Wojcechowskyj, Jason A; Bell, Samantha L et al. (2018) Quantitative Yeast Genetic Interaction Profiling of Bacterial Effector Proteins Uncovers a Role for the Human Retromer in Salmonella Infection. Cell Syst 7:323-338.e6
Bui, Nam; Huang, Justin K; Bojorquez-Gomez, Ana et al. (2018) Disruption of NSD1 in Head and Neck Cancer Promotes Favorable Chemotherapeutic Responses Linked to Hypomethylation. Mol Cancer Ther 17:1585-1594
Huang, Justin K; Carlin, Daniel E; Yu, Michael Ku et al. (2018) Systematic Evaluation of Molecular Networks for Discovery of Disease Genes. Cell Syst 6:484-495.e5
Palovcak, Eugene; Wang, Feng; Zheng, Shawn Q et al. (2018) A simple and robust procedure for preparing graphene-oxide cryo-EM grids. J Struct Biol 204:80-84

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