C. Core 3 - Infrastructure The computational infrastructure for iDASH will be provided by the San Diego Supercomputer Center (SDSC), which offers a large spectrum of services, hardware and software packages, accommodating the needs of the most modest computational projects as well as those requiring high performance computing (HPC) and unconventional innovative storage and network architectures. SDSC is certified and accredited to meet both FISMA and HIPAA requirements. IDASH will enable researchers from projects described in this proposal as well as other researchers across the country to access resources needed to complete data and knowledge discovery activities and accomplish their scientific goals. The underiying scalable technical infrastructure will be enhanced with technical and domain experts, described in Cores 1 and 2.

Agency
National Institute of Health (NIH)
Institute
National Heart, Lung, and Blood Institute (NHLBI)
Type
Specialized Center--Cooperative Agreements (U54)
Project #
5U54HL108460-04
Application #
8509011
Study Section
Special Emphasis Panel (ZRG1-BST-K)
Project Start
Project End
Budget Start
2013-07-01
Budget End
2014-06-30
Support Year
4
Fiscal Year
2013
Total Cost
$197,374
Indirect Cost
$63,227
Name
University of California San Diego
Department
Type
DUNS #
804355790
City
La Jolla
State
CA
Country
United States
Zip Code
92093
Groat, Danielle; Grando, Maria Adela; Soni, Hiral et al. (2017) Self-Management Behaviors in Adults on Insulin Pump Therapy. J Diabetes Sci Technol 11:233-239
Eguchi, Akiko; Lazaro, Raul G; Wang, Jiaohong et al. (2017) Extracellular vesicles released by hepatocytes from gastric infusion model of alcoholic liver disease contain a MicroRNA barcode that can be detected in blood. Hepatology 65:475-490
Weng, Wei-Hung; Wagholikar, Kavishwar B; McCray, Alexa T et al. (2017) Medical subdomain classification of clinical notes using a machine learning-based natural language processing approach. BMC Med Inform Decis Mak 17:155
Doan, Son; Ritchart, Amanda; Perry, Nicholas et al. (2017) How Do You #relax When You're #stressed? A Content Analysis and Infodemiology Study of Stress-Related Tweets. JMIR Public Health Surveill 3:e35
Wang, Shuang; Jiang, Xiaoqian; Singh, Siddharth et al. (2017) Genome privacy: challenges, technical approaches to mitigate risk, and ethical considerations in the United States. Ann N Y Acad Sci 1387:73-83
Chen, Feng; Wang, Shuang; Jiang, Xiaoqian et al. (2017) PRINCESS: Privacy-protecting Rare disease International Network Collaboration via Encryption through Software guard extensionS. Bioinformatics 33:871-878
Spahn, Philipp N; Bath, Tyler; Weiss, Ryan J et al. (2017) PinAPL-Py: A comprehensive web-application for the analysis of CRISPR/Cas9 screens. Sci Rep 7:15854
Grando, Maria Adela; Groat, Danielle; Soni, Hiral et al. (2017) Characterization of Exercise and Alcohol Self-Management Behaviors of Type 1 Diabetes Patients on Insulin Pump Therapy. J Diabetes Sci Technol 11:240-246
Dulai, Parambir S; Singh, Siddharth; Jiang, Xiaoqian et al. (2016) The Real-World Effectiveness and Safety of Vedolizumab for Moderate-Severe Crohn's Disease: Results From the US VICTORY Consortium. Am J Gastroenterol 111:1147-55
Komenaka, Ian K; Nodora, Jesse N; Madlensky, Lisa et al. (2016) Participation of low-income women in genetic cancer risk assessment and BRCA 1/2 testing: the experience of a safety-net institution. J Community Genet 7:177-83

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