Core 4 - Training The training core will ensure that the students involved in IDASH-related research will have a formal structure to be trained in health informatics and an opportunity to directly apply their knowledge. Two programs of study will be supported to ensure short- and long-term opportunities as well as to reach a diverse universe of candidates: (1) a doctoral program in Bioinformatics at UCSD, and (2) a master's degree in Bioinformatics and Medical Informatics at San Diego State University (SDSU). Two additional courses {Principles of Biomedical Informatics and either Bioinformatics Applications to Human Disease or Biomedical Decision Support, taught by the PI and members of the Division of Biomedical Informatics, plus a weekly seminar in medical informatics and a rotation at the UCSD Medical Center will be required for graduate students funded by this grant. Additional trainees are expected to part:icipate in IDASH and will be funded by existing mechanisms. Recruitment of under-represented minorities and women will utilize existing programs at UCSD and SDSU as well as investigators'professional networks.

National Institute of Health (NIH)
Specialized Center--Cooperative Agreements (U54)
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Special Emphasis Panel (ZRG1)
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University of California San Diego
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Ji, Zhanglong; Jiang, Xiaoqian; Wang, Shuang et al. (2014) Differentially private distributed logistic regression using private and public data. BMC Med Genomics 7 Suppl 1:S14
Li, Zhonghan; Chao, Ti-Chun; Chang, Kung-Yen et al. (2014) The long noncoding RNA THRIL regulates TNF? expression through its interaction with hnRNPL. Proc Natl Acad Sci U S A 111:1002-7
Hinske, Ludwig Christian; Fran├ža, Gustavo S; Torres, Hugo A M et al. (2014) miRIAD-integrating microRNA inter- and intragenic data. Database (Oxford) 2014:
Kinsella, Marcus; Patel, Anand; Bafna, Vineet (2014) The elusive evidence for chromothripsis. Nucleic Acids Res 42:8231-42
Patel, Anand; Schwab, Richard; Liu, Yu-Tsueng et al. (2014) Amplification and thrifty single-molecule sequencing of recurrent somatic structural variations. Genome Res 24:318-28
Hepler, N Lance; Scheffler, Konrad; Weaver, Steven et al. (2014) IDEPI: rapid prediction of HIV-1 antibody epitopes and other phenotypic features from sequence data using a flexible machine learning platform. PLoS Comput Biol 10:e1003842
Ronen, Roy; Zhou, Dan; Bafna, Vineet et al. (2014) The genetic basis of chronic mountain sickness. Physiology (Bethesda) 29:403-12
Gordon, C T; Jimenez-Fernandez, S; Daniels, L B et al. (2014) Pregnancy in women with a history of Kawasaki disease: management and outcomes. BJOG 121:1431-8
Gan, Zhuohui; Wang, Jianwu; Salomonis, Nathan et al. (2014) MAAMD: a workflow to standardize meta-analyses and comparison of affymetrix microarray data. BMC Bioinformatics 15:69
Doan, Son; Lin, Ko-Wei; Conway, Mike et al. (2014) PhenDisco: phenotype discovery system for the database of genotypes and phenotypes. J Am Med Inform Assoc 21:31-6

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