Bacterial transport in Gram-negative organisms is initiated by passage of the transported species through a transmembrane beta-barrel in the outer membrane. The transport of iron is particularly important for bacterial growth, and outer membrane iron transporters are therefore major vaccine targets against pathogens such as Neisseria and Haemophilus. Iron transport across the outer membrane is interesting to study because this family of transporters shows high affinity and specificity for Fe(III)-ligand complexes and because the transport process requires energy derived from the proton motive force across the inner membrane. The required energy is transduced by transient complexation with an integral inner membrane protein, TonB, resulting in a complex that spans both the inner and outer membranes, as well as the periplasmic space. The first crystal structure [1] of an E. coli TonB-dependent receptor, ferric enterobactin receptor (FepA = 80 kDa), revealed that this iron transporter uses a 22-stranded beta-barrel to span the outer membrane, with an unanticipated globular domain folded into the barrel interior. The globular domain appears to function in both ligand binding at the extracellular side of the membrane, and in TonB recognition at the periplasmic side of the membrane. In this 'ground state' structure, the globular domain inside the barrel completely occludes the barrel lumen, and we do not understand how ferric enterobactin (700 Da) is transported. To understand more about iron transport, three projects have been initiated. (1) Ligand recognition and transport Colicin I receptor (Cir) is a 67 kD Ton-B dependent outer membrane receptor which transports colicins Ia and Ib (~70 kDa) as well as its physiological iron-ligand. Since the structure of FepA does not indicate how a 700 Da molecule should pass through the beta-barrel, we are intrigued by the problem of transporting a protein which is 100 times larger. Colicin I receptor also functions in the uptake of catechol-substituted antibiotics and in the uptake of 2,3-dihydroxybenzoate derivatives. Particularly because colicin I receptor transports catechol-substituted antibiotics, a crystal structure will be useful to the field of antibiotic research. An added benefit from studying this particular receptor is that the structure of colicin Ia has been solved and the domain which should recognise and bind Cir has been identified. We have grown crystals of the native receptor which diffract X-rays to 3.5A resolution and have formed a stable complex between Cir and colicin Ia. Co-crystallisation experiments are underway. (2) Regulation of iron transport at the E. coli outer membrane Escherichia coli K-12 synthesises six siderophore-mediated transport systems for the acquisition of Fe3+ (such as colicin Ia and ferric enterobactin receptors, discussed above). Each system encodes a distinct transmembrane receptor for transport across the outer membrane. Transcription of ferric siderophore transport genes can be induced by ferric citrate. However, it is not intracellular ferric citrate but extracellular ferric citrate that serves as an inducer. Induction involves ferric citrate receptor (FecA), the outer membrane transporter, FecR, an inner membrane protein that transmits the signal into the cytoplasm, and FecI, a sigma factor that mediates specific binding of the RNA polymerase core enzyme to the promoter region upstream of fecA. We have just solved the structures of FecA alone and in complex with citrate and ferric citrate to a resolution of 2.1A (manuscript in preparation). These three structures together shed new light on apo- and holo-ligand binding. We are currently working on crystal structures of FecA complexed with the periplasmic portions of FecR and TonB. The complex structures should give us insight into transcription and transport processes. (3) Structure of the Neisseria meningitidis transferrin binding protein complexed to human transferrin Neisseria meningitidis, a Gram-negative bacterium, is the causative agent of bacterial meningitidis. This blood-borne pathogen acquires iron from human transferrin (80 kDa) through an outer membrane receptor complex, transferrin binding proteins A and B (TbpA = 100 kDa; TbpB = 68-85 kDa). TbpA and TbpB form a discreet complex to bind transferrin synergistically, yet each protein is also capable of binding transferrin on its own. Both TbpA and TbpB are current vaccine targets. While TbpB is predicted to be a surface-exposed lipoprotein, TbpA is a member of the TonB-dependent outer membrane receptor/transporter family. We have determined the stoichiometry of the TbpA:TbpB:transferrin complex to be 2:1:1, yielding a total size of 360 kDa. Crystallisation experiments are underway for (a) TbpA alone, (b) TbpA in complex with transferrin, (c) TbpB alone, (d) TbpB in complex with transferrin, and (e) the entire TbpA:TbpB:tranferrin complex. Crystals have been obtained in several cases and we project the first structure to be solved by the end of 2003. We expect that our crystal structures will aid vaccine development for serotype B meningitis, for which there is currently no vaccine available.

Agency
National Institute of Health (NIH)
Institute
National Institute of Diabetes and Digestive and Kidney Diseases (NIDDK)
Type
Intramural Research (Z01)
Project #
1Z01DK011003-01
Application #
6664153
Study Section
(LMB)
Project Start
Project End
Budget Start
Budget End
Support Year
1
Fiscal Year
2002
Total Cost
Indirect Cost
Name
U.S. National Inst Diabetes/Digst/Kidney
Department
Type
DUNS #
City
State
Country
United States
Zip Code
Wally, Jeremy; Halbrooks, Peter J; Vonrhein, Clemens et al. (2006) The crystal structure of iron-free human serum transferrin provides insight into inter-lobe communication and receptor binding. J Biol Chem 281:24934-44
Buchanan, Susan K (2005) Bacterial metal detectors. Mol Microbiol 58:1205-9
Grizot, Sylvestre; Buchanan, Susan K (2004) Structure of the OmpA-like domain of RmpM from Neisseria meningitidis. Mol Microbiol 51:1027-37
Schalk, Isabelle J; Yue, Wyatt W; Buchanan, Susan K (2004) Recognition of iron-free siderophores by TonB-dependent iron transporters. Mol Microbiol 54:14-22
Oke, M; Sarra, R; Ghirlando, R et al. (2004) The plug domain of a neisserial TonB-dependent transporter retains structural integrity in the absence of its transmembrane beta-barrel. FEBS Lett 564:294-300
Yue, Wyatt W; Grizot, Sylvestre; Buchanan, Susan K (2003) Structural evidence for iron-free citrate and ferric citrate binding to the TonB-dependent outer membrane transporter FecA. J Mol Biol 332:353-68