In response to external and internal signals, mammalian cells elicit changes in gene expression patterns that profoundly influence the global cellular response. The transcriptional events that regulate gene expression changes have been thoroughly studied, but less-well understood post-transcriptional processes are emerging as major regulatory mechanisms. Post-transcriptional gene regulation includes pre-mRNA processing and maturation, mRNA transport, stability and translation, as well as protein processing, modification and degradation. We are keenly interested in the mechanisms that regulate the expression of proliferative, cell cycle-regulatory, and stress-response proteins. Over the past 14 years, this Project has examined numerous RBPs, noncoding RNAs, and their influence on gene expression patterns. We have paid particular attention to their influence on the stress and proliferative response of cells, two processes that are severely impaired during aging. In the past funding period, we have studied NF90 and its influence on the stress response(Kuwano et al., Nuc. Acids Res. 2010). Cancer-related studies in collaboration with other laboratories have been focused on HuR in breast cancer (Calaluce et al., BMC Cancer, 2010), HuR in pancreatic cancer (Williams et al., PLoS ONE, 2010), and EBP-1 in prostate cancer (Zhou et al., Nuc. Acids Res. 2010). We have also participated in studies that investigated the influence of RBPs in gastrointestinal homeostasis by focusing on the gut epithelium (Wang et al., Biochem. J., 2010), the impact of polyamines on intestinal integrity (Zou et al., Mol. Cell. Biol., 2010), and liver carcinogenesis (Vazquez-Chantada et al., Gastroenterology, 2010). In a brief meeting report (Black and Gorospe, RNA Biology, 2010), we summarized the state of the field.

Agency
National Institute of Health (NIH)
Institute
National Institute on Aging (NIA)
Type
Investigator-Initiated Intramural Research Projects (ZIA)
Project #
1ZIAAG000511-14
Application #
8335868
Study Section
Project Start
Project End
Budget Start
Budget End
Support Year
14
Fiscal Year
2011
Total Cost
$287,514
Indirect Cost
Name
National Institute on Aging
Department
Type
DUNS #
City
State
Country
Zip Code
Panda, Amaresh C; Gorospe, Myriam (2018) Detection and Analysis of Circular RNAs by RT-PCR. Bio Protoc 8:
Chung, Hee Kyoung; Wang, Shelley R; Xiao, Lan et al. (2018) ?4 Coordinates Small Intestinal Epithelium Homeostasis by Regulating Stability of HuR. Mol Cell Biol 38:
Xiao, Lan; Wu, Jing; Wang, Jun-Yao et al. (2018) Long Noncoding RNA uc.173 Promotes Renewal of the Intestinal Mucosa by Inducing Degradation of MicroRNA 195. Gastroenterology 154:599-611
Noh, Ji Heon; Gorospe, Myriam (2018) AKTions by Cytoplasmic lncRNA CASC9 Promote Hepatocellular Carcinoma Survival. Hepatology 68:1675-1677
Wang, Jun-Yao; Cui, Yu-Hong; Xiao, Lan et al. (2018) Regulation of Intestinal Epithelial Barrier Function by Long Noncoding RNA uc.173 through Interaction with MicroRNA 29b. Mol Cell Biol 38:
Panda, Amaresh C; Dudekula, Dawood B; Abdelmohsen, Kotb et al. (2018) Analysis of Circular RNAs Using the Web Tool CircInteractome. Methods Mol Biol 1724:43-56
Cui, Chang-Yi; Noh, Ji Heon; Michel, Marc et al. (2018) STIM1, but not STIM2, Is the Calcium Sensor Critical for Sweat Secretion. J Invest Dermatol 138:704-707
Noh, Ji Heon; Kim, Kyoung Mi; McClusky, Waverly G et al. (2018) Cytoplasmic functions of long noncoding RNAs. Wiley Interdiscip Rev RNA 9:e1471
Basu, Sandip K; Gonit, Mesfin; Salotti, Jacqueline et al. (2018) A RAS-CaMKK?-AMPK?2 pathway promotes senescence by licensing post-translational activation of C/EBP? through a novel 3'UTR mechanism. Oncogene 37:3528-3548
Anantharaman, Aparna; Gholamalamdari, Omid; Khan, Abid et al. (2017) RNA-editing enzymes ADAR1 and ADAR2 coordinately regulate the editing and expression of Ctn RNA. FEBS Lett 591:2890-2904

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