Progress during the past year includes: Hao et all, EMBO J., 2015 The replisome is important for DNA replication checkpoint activation, but how specific components of the replisome coordinate with ATR to activate Chk1 in human cells remains largely unknown. Here, we demonstrate that And-1, a replisome component, acts together with ATR to activate Chk1. And-1 is phosphorylated at T826 by ATR following replication stress, and this phosphorylation is required for And-1 to accumulate at the damage sites, where And-1 promotes the interaction between Claspin and Chk1, thereby stimulating efficient Chk1 activation by ATR. Significantly, And-1 binds directly to ssDNA and facilitates the association of Claspin with ssDNA. Furthermore, And-1 associates with replication forks and is required for the recovery of stalled forks. These studies establish a novel ATR-And-1 axis as an important regulator for efficient Chk1 activation and reveal a novel mechanism of how the replisome regulates the replication checkpoint and genomic stability. Vassilev et al., Oncotarget, 2016 Nuclear genome duplication is normally restricted to once per cell division, but aberrant events that allow excess DNA replication (EDR) promote genomic instability and aneuploidy, both of which are characteristics of cancer development. Here we provide the first comprehensive identification of genes that are essential to restrict genome duplication to once per cell division. An siRNA library of 21,584 human genes was screened for those that prevent EDR in cancer cells with undetectable chromosomal instability. Candidates were validated by testing multiple siRNAs and chemical inhibitors on both TP53+ and TP53- cells to reveal the relevance of this ubiquitous tumor suppressor to preventing EDR, and in the presence of an apoptosis inhibitor to reveal the full extent of EDR. The results revealed 42 genes that prevented either DNA re-replication or unscheduled endoreplication. All of them participate in one or more of eight cell cycle events. Seventeen of them have not been identified previously in this capacity. Remarkably, 14 of the 42 genes have been shown to prevent aneuploidy in mice. Moreover, suppressing a gene that prevents EDR increased the ability of the chemotherapeutic drug Paclitaxel to induce EDR, suggesting new opportunities for synthetic lethalities in the treatment of human cancers.Nuclear genome duplication is normally restricted to once per cell division, but aberrant events that allow excess DNA replication (EDR) promote genomic instability and aneuploidy, both of which are characteristics of cancer development. Here we provide the first comprehensive identification of genes that are essential to restrict genome duplication to once per cell division. An siRNA library of 21,584 human genes was screened for those that prevent EDR in cancer cells with undetectable chromosomal instability. Candidates were validated by testing multiple siRNAs and chemical inhibitors on both TP53+ and TP53- cells to reveal the relevance of this ubiquitous tumor suppressor to preventing EDR, and in the presence of an apoptosis inhibitor to reveal the full extent of EDR. The results revealed 42 genes that prevented either DNA re-replication or unscheduled endoreplication. All of them participate in one or more of eight cell cycle events. Seventeen of them have not been identified previously in this capacity. Remarkably, 14 of the 42 genes have been shown to prevent aneuploidy in mice. Moreover, suppressing a gene that prevents EDR increased the ability of the chemotherapeutic drug Paclitaxel to induce EDR, suggesting new opportunities for synthetic lethalities in the treatment of human cancers.

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21
Fiscal Year
2016
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Indirect Cost
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U.S. National Inst/Child Hlth/Human Dev
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Ullah, Rahim; Dar, Saira; Ahmad, Tanvir et al. (2018) CDK1 inhibition facilitates formation of syncytiotrophoblasts and expression of human Chorionic Gonadotropin. Placenta 66:57-64
Vassilev, Alex; DePamphilis, Melvin L (2017) Links between DNA Replication, Stem Cells and Cancer. Genes (Basel) 8:
Adler-Wailes, Diane C; Kramer, Joshua A; DePamphilis, Melvin L (2017) Geminin Is Essential for Pluripotent Cell Viability During Teratoma Formation, but Not for Differentiated Cell Viability During Teratoma Expansion. Stem Cells Dev 26:285-302
DePamphilis, M L (2016) Genome Duplication at the Beginning of Mammalian Development. Curr Top Dev Biol 120:55-102
DePamphilis, Melvin L (2016) Preface. Curr Top Dev Biol 120:xiii-xxi
Vassilev, Alex; Lee, Chrissie Y; Vassilev, Boris et al. (2016) Identification of genes that are essential to restrict genome duplication to once per cell division. Oncotarget 7:34956-76
DePamphilis, Melvin L (2016) Genome Duplication: The Heartbeat of Developing Organisms. Curr Top Dev Biol 116:201-29
Hao, Jing; de Renty, Christelle; Li, Yongming et al. (2015) And-1 coordinates with Claspin for efficient Chk1 activation in response to replication stress. EMBO J 34:2096-110
Huang, Yi-Yuan; Kaneko, Kotaro J; Pan, Haiyan et al. (2015) Geminin Is Essential to Prevent DNA Re-Replication-Dependent Apoptosis in Pluripotent Cells, but not in Differentiated Cells. Stem Cells :
de Renty, Christelle; DePamphilis, Melvin L; Ullah, Zakir (2014) Cytoplasmic localization of p21 protects trophoblast giant cells from DNA damage induced apoptosis. PLoS One 9:e97434

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