We have established a mouse model of dust mite-induced asthma that recapitulates the key features of human asthma, namely airway hyper-responsiveness, inflammation, and mucus production. In order to identify genes that mediate susceptibility to these two phenotypes, we are conducting a large quantitative trait locus (QTL) mapping project using a newly establishing population of genetically diverse mice known as the Collaborative Cross (CC). Mice from the CC are derived from an eight-way cross of common (A/J, C57BL/6J, 129/SvImJ, NOD/ShILtJ and NZO/HILtJ) and wild-derived (WSB/EiJ, PWK/PhJ and CAST/EiJ) inbred strains. The CC was designed to capture maximal genetic diversity of inbred strains and at the same time minimize the effects of population structure, thereby overcoming many of the limitations of previous mapping approaches. Thus far, we have phenotyped more than 150 mice and have made three notable observations: (1) these mice exhibit an incredible range of asthma phenotype diversity, (2) baseline lung function is strongly correlated with lung function after Derp1 challenge, and (3) the degree of airway inflammation caused by Derp1 does not correlate with impaired lung function. During the next year, we plan to finish phenotyping all CC strains, then map the QTLs in collaboration with colleagues at the University of North Carolina and the Jackson Laboratory. Once QTL have been identified, we plan to test the role of human homologs in population-based studies of allergic asthma through collaborations that are already underway.

Project Start
Project End
Budget Start
Budget End
Support Year
2
Fiscal Year
2009
Total Cost
$559,385
Indirect Cost
Name
National Human Genome Research Institute
Department
Type
DUNS #
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Donoghue, Lauren J; Livraghi-Butrico, Alessandra; McFadden, Kathryn M et al. (2017) Identification of trans Protein QTL for Secreted Airway Mucins in Mice and a Causal Role for Bpifb1. Genetics 207:801-812
Kelada, Samir N P (2016) Plethysmography Phenotype QTL in Mice Before and After Allergen Sensitization and Challenge. G3 (Bethesda) 6:2857-65
Kelada, Samir N P; Carpenter, Danielle E; Aylor, David L et al. (2014) Integrative genetic analysis of allergic inflammation in the murine lung. Am J Respir Cell Mol Biol 51:436-45
Rutledge, Holly; Aylor, David L; Carpenter, Danielle E et al. (2014) Genetic regulation of Zfp30, CXCL1, and neutrophilic inflammation in murine lung. Genetics 198:735-45
Kelada, Samir N P; Aylor, David L; Peck, Bailey C E et al. (2012) Genetic analysis of hematological parameters in incipient lines of the collaborative cross. G3 (Bethesda) 2:157-65
Kelada, Samir N P; Wilson, Mark S; Tavarez, Urraca et al. (2011) Strain-dependent genomic factors affect allergen-induced airway hyperresponsiveness in mice. Am J Respir Cell Mol Biol 45:817-24
Aylor, David L; Valdar, William; Foulds-Mathes, Wendy et al. (2011) Genetic analysis of complex traits in the emerging Collaborative Cross. Genome Res 21:1213-22