In collaboration with NIH-CRM, we previously generated iPSCs derived from neuronal precursors differentiated from the H1 (WA01) hES cell line and compared their gene expression and methylation profiles to the parental line. This research was published in 2014. We also published several papers this year on the culture of human pluripotent stem cells and are co-authors on a publication describing differentiation of iPSCs toward bone and cartilage. In collaboration with NIH-CRM, 5 transgenic hESC lines, which express traceable markers from cell type-specific promoters, were generated using a Zinc Finger nuclease-assisted gene-targeting method to integrate the transgenes into AAVS1, one of the known safe harbor sites in the human genome. Each transgene contains a gene for ZS green and a drug-selection marker. Correct transgene integration as well as normal karyotype was confirmed for each line and expression of ZS green from appropriate cell types has been confirmed in 3 lines. All lines have been deposited with WiCell and, upon ratification of appropriate agreements, will be available for distribution to the community. This manuscript is currently submitted for review. In terms of bringing pluripotent stem cells to the clinic, we have been evaluating novel xeno-free substrates, media and small molecule inhibitors as well as non-integrating methods of reprogramming. These methods include episomal plasmids, Sendai virus and microRNA boosted mRNA- based reprogramming. A novel self-replicating synthetic RNA reprogramming system will also be tested. We have extended our studies on the novel non-colony type (NCM) monolayer method for pluripotent cell culture using these different small molecules, media and alternative substrates. We will continue to improve the method for application to high thoughput and scalability for drug screening and therapeutic use. Finally, we have been involved in mentoring and teaching standard and feeder-free, pluripotent stem cell culture, assisting and advising on the generation of iPSCs from collaborators samples as well as assisting and advising on differentiation strategies as requested. As always, we update the SCU website with protocols and information as it becomes available to aid other researchers in their studies.

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11
Fiscal Year
2014
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Jiang, Xueying; Detera-Wadleigh, Sevilla D; Akula, Nirmala et al. (2018) Sodium valproate rescues expression of TRANK1 in iPSC-derived neural cells that carry a genetic variant associated with serious mental illness. Mol Psychiatry :
Chen, Kevin G; Mallon, Barbara S; Park, Kyeyoon et al. (2018) Pluripotent Stem Cell Platforms for Drug Discovery. Trends Mol Med 24:805-820
Ou, Jingxing; Ball, John M; Luan, Yizhao et al. (2018) iPSCs from a Hibernator Provide a Platform for Studying Cold Adaptation and Its Potential Medical Applications. Cell 173:851-863.e16
Vallabhaneni, Haritha; Lynch, Patrick J; Chen, Guibin et al. (2018) High Basal Levels of ?H2AX in Human Induced Pluripotent Stem Cells Are Linked to Replication-Associated DNA Damage and Repair. Stem Cells :
Horikawa, Izumi; Park, Kye-Yoon; Isogaya, Kazunobu et al. (2017) ?133p53 represses p53-inducible senescence genes and enhances the generation of human induced pluripotent stem cells. Cell Death Differ 24:1017-1028
Nandal, Anjali; Mallon, Barbara; Telugu, Bhanu P (2017) Efficient Generation and Editing of Feeder-free IPSCs from Human Pancreatic Cells Using the CRISPR-Cas9 System. J Vis Exp :
Lin, Yongshun; Linask, Kaari L; Mallon, Barbara et al. (2016) Heparin Promotes Cardiac Differentiation of Human Pluripotent Stem Cells in Chemically Defined Albumin-Free Medium, Enabling Consistent Manufacture of Cardiomyocytes. Stem Cells Transl Med :
Bhadriraju, Kiran; Halter, Michael; Amelot, Julien et al. (2016) Large-scale time-lapse microscopy of Oct4 expression in human embryonic stem cell colonies. Stem Cell Res 17:122-9
Lee, Chun-Ting; Chen, Jia; Kindberg, Abigail A et al. (2016) CYP3A5 Mediates Effects of Cocaine on Human Neocorticogenesis: Studies using an In Vitro 3D Self-Organized hPSC Model with a Single Cortex-Like Unit. Neuropsychopharmacology :
Cerbini, Trevor; Funahashi, Ray; Luo, Yongquan et al. (2015) Transcription activator-like effector nuclease (TALEN)-mediated CLYBL targeting enables enhanced transgene expression and one-step generation of dual reporter human induced pluripotent stem cell (iPSC) and neural stem cell (NSC) lines. PLoS One 10:e0116032

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