New strategies for the production and screening of diverse organic molecules have recently emerged that can greatly facilitate the use of molecular structural information to discover novel ligands. The molecular structures studied in this Program Project-HIV gp41, HIV reverse transcriptase, cellular transcription factors for HIV replication--are current or potential targets for these approaches, and the specific aims of the various components involve their implementation. A chemistry core will provide support for chemical library synthesis and screening for various chemical syntheses. The core will be located within the new Harvard Institute for Chemistry and Cell Biology (ICCB), which will provide access to a large range of technologies and equipment and to new developments in combinatorial chemistry. The core will consist of one trained chemist (to be supervised by a senior chemist from the Institute), who will provide the following services: supply of monomers, linkers, encoding tags and beads, for library development within the individual projects; bead decoding; resynthesis of """"""""hits"""""""" for re-testing; synthesis of focused libraries for determination of structure-activity relationships.

Agency
National Institute of Health (NIH)
Institute
National Institute of General Medical Sciences (NIGMS)
Type
Research Program Projects (P01)
Project #
5P01GM039589-15
Application #
6631269
Study Section
Project Start
2002-08-01
Project End
2003-07-31
Budget Start
Budget End
Support Year
15
Fiscal Year
2002
Total Cost
$106,600
Indirect Cost
Name
Harvard University
Department
Type
DUNS #
071723621
City
Cambridge
State
MA
Country
United States
Zip Code
02138
Verdine, Gregory L; Norman, Derek P G (2003) Covalent trapping of protein-DNA complexes. Annu Rev Biochem 72:337-66
Abdulaev, Najmoutin G; Strassmaier, Timothy T; Ngo, Tony et al. (2002) Grafting segments from the extracellular surface of CCR5 onto a bacteriorhodopsin transmembrane scaffold confers HIV-1 coreceptor activity. Structure 10:515-25
Lin, C H; Hare, B J; Wagner, G et al. (2001) A small domain of CBP/p300 binds diverse proteins: solution structure and functional studies. Mol Cell 8:581-90
Mantis, N J; Kozlowski, P A; Mielcarz, D W et al. (2001) Immunization of mice with recombinant gp41 in a systemic prime/mucosal boost protocol induces HIV-1-specific serum IgG and secretory IgA antibodies. Vaccine 19:3990-4001
Zhou, G; Ferrer, M; Chopra, R et al. (2000) The structure of an HIV-1 specific cell entry inhibitor in complex with the HIV-1 gp41 trimeric core. Bioorg Med Chem 8:2219-27
Huang, H; Harrison, S C; Verdine, G L (2000) Trapping of a catalytic HIV reverse transcriptase*template:primer complex through a disulfide bond. Chem Biol 7:355-64
Ferrer, M; Harrison, S C (1999) Peptide ligands to human immunodeficiency virus type 1 gp120 identified from phage display libraries. J Virol 73:5795-802
Frankel, A D; Young, J A (1998) HIV-1: fifteen proteins and an RNA. Annu Rev Biochem 67:1-25
Huang, H; Chopra, R; Verdine, G L et al. (1998) Structure of a covalently trapped catalytic complex of HIV-1 reverse transcriptase: implications for drug resistance. Science 282:1669-75
Weissenhorn, W; Calder, L J; Dessen, A et al. (1997) Assembly of a rod-shaped chimera of a trimeric GCN4 zipper and the HIV-1 gp41 ectodomain expressed in Escherichia coli. Proc Natl Acad Sci U S A 94:6065-9

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