?Omics? technologies emerged relatively recently and evolved rapidly, becoming essential to almost every aspect of cancer research. In view of this, the Genomics & Epigenomics Shared Resource (GESR) is an indispensable Shared Resource for the Georgetown Lombardi Comprehensive Cancer Center (LCCC) and serves investigators on both the DC and NJ campuses. The objective of the GESR is to provide investigators with diverse, state-of-the- art services for genomic and epigenomic studies, such as DNA/RNA quality assessment, mRNA expression profiling, miRNA expression profiling, DNA sequencing, single nucleotide polymorphism (SNP) genotyping, copy number variation (CNV) analysis, DNA methylation analysis and label-free molecular interaction analysis. The GESR uses a variety of platforms for these services, including bioanalyzer, microarray, next-generation sequencing (NGS), real-time polymerase chain reaction (RT-PCR), count-based expression analysis (NanoString) and surface plasmon resonance (SPR). To facilitate these services, the GESR assists users in DNA/RNA isolation, DNA plating and assay preparation and bioinformatics. In fiscal year (FY) 2017, the GESR provided services to 36 LCCC members from all four Research Programs. It supported 85 manuscripts published in peer-reviewed journals in the funding period. Resource Director Habtom W. Ressom, PhD, has experience in designing and developing workflows to ensure reproducible omics experiments. He is responsible for oversight of the GESR overall services, staff, budget, policies and strategic planning and for providing bioinformatics services. Resource Assistant Director Aykut ren, MD, is an expert in SPR technologies and their application for measurement of the concentrations of specific molecules and determination of intermolecular interactions. Director of Operations David S. Goerlitz, MS, has extensive training and experience in genomic and epigenomic technologies and assays. He manages the day- to-day operations of the GESR and assists investigators with assay design and experimental setup.

Agency
National Institute of Health (NIH)
Institute
National Cancer Institute (NCI)
Type
Center Core Grants (P30)
Project #
5P30CA051008-27
Application #
9924512
Study Section
Subcommittee I - Transistion to Independence (NCI)
Project Start
Project End
Budget Start
2020-05-01
Budget End
2021-04-30
Support Year
27
Fiscal Year
2020
Total Cost
Indirect Cost
Name
Georgetown University
Department
Type
DUNS #
049515844
City
Washington
State
DC
Country
United States
Zip Code
20057
Kozlik, Petr; Goldman, Radoslav; Sanda, Miloslav (2018) Hydrophilic interaction liquid chromatography in the separation of glycopeptides and their isomers. Anal Bioanal Chem 410:5001-5008
Zheng, Wenjie; Wu, Xiuhua; Goudarzi, Maryam et al. (2018) Metabolomic alterations associated with Behçet's disease. Arthritis Res Ther 20:214
Getnet, Derese; Gautam, Aarti; Kumar, Raina et al. (2018) Poisoning with Soman, an Organophosphorus Nerve Agent, Alters Fecal Bacterial Biota and Urine Metabolites: a case for Novel Signatures for Asymptomatic Nerve Agent Exposure. Appl Environ Microbiol :
Bluethmann, Shirley M; Sciamanna, Christopher N; Winkels, Renate M et al. (2018) Healthy Living After Cancer Treatment: Considerations for Clinical and Community Practice. Am J Lifestyle Med 12:215-219
Graves, Kristi D; Hall, Michael J; Tercyak, Kenneth P (2018) Introduction to the Special Issue on Clinical and Public Health Genomics: Opportunities for translational behavioral medicine research, practice, and policy. Transl Behav Med 8:4-6
Aldeghaither, Dalal S; Zahavi, David J; Murray, Joseph C et al. (2018) A Mechanism of Resistance to Antibody-Targeted Immune Attack. Cancer Immunol Res :
Bhuvaneshwar, Krithika; Song, Lei; Madhavan, Subha et al. (2018) viGEN: An Open Source Pipeline for the Detection and Quantification of Viral RNA in Human Tumors. Front Microbiol 9:1172
Sosin, Michael; Gupta, Surupa Sen; Wang, Jessica S et al. (2018) A Prospective Analysis of Quality of Life and Toxicity Outcomes in Treating Early Breast Cancer With Breast Conservation Therapy and Intraoperative Radiation Therapy. Front Oncol 8:545
Lipkus, Isaac M; Mays, Darren (2018) Comparing harm beliefs and risk perceptions among young adult waterpipe tobacco smokers and nonsmokers: Implications for cessation and prevention. Addict Behav Rep 7:103-110
Tassi, Elena; Garman, Khalid A; Schmidt, Marcel O et al. (2018) Fibroblast Growth Factor Binding Protein 3 (FGFBP3) impacts carbohydrate and lipid metabolism. Sci Rep 8:15973

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