Solid-state nuclear magnetic resonance spectroscopy and resonance Raman spectroscopy are to be used as non-perturbative means of studying the structures, dynamics and functional mechanisms of proteins and peptides involved in membrane transport. In particular, we plan to study the purple membrane fragments of the plasma membrane of the halobacterium halobium, which contains a single protein that executes light driven proton transport, and model membranes containing enniatin ionophores, which facilitate passive cation transport. Samples will be isotopically enriched at specific sites to enhance NMR signals of interest, suppress interfering NMR signals, and to induce informative shifts in the resonance Raman spectrum. In the case of the purple membrane, we hope to learn which groups are exposed to the aqueous environment in native and bleached samples, what the pK's of the ionizable residues are, which ionizable groups change their state of protonation during the photo reaction cycle, which groups are in direct interaction with the chromophore, and what types of moleculr motion occur in various regions of the protein. In the case of the enniatin ionophores, we hope to learn what the stoichiometries and structures of the metal ion complexes are and what types of molecular motion occur in the aliphatic and aromatic side chains. In addition to illuminating the properties of these particular systems, it is hoped that these biophysical studies will provide models for other membrane transport systems and integral membrane proteins in general. Information about such proteins is ultimately important to our understanding of normal and pathological cell regulation and function.

Agency
National Institute of Health (NIH)
Institute
National Institute of General Medical Sciences (NIGMS)
Type
Research Project (R01)
Project #
2R01GM036810-02
Application #
3291307
Study Section
Biophysics and Biophysical Chemistry B Study Section (BBCB)
Project Start
1985-09-30
Project End
1991-03-31
Budget Start
1986-04-01
Budget End
1987-03-31
Support Year
2
Fiscal Year
1986
Total Cost
Indirect Cost
Name
Brandeis University
Department
Type
Schools of Arts and Sciences
DUNS #
616845814
City
Waltham
State
MA
Country
United States
Zip Code
02454
Belenky, Marina; Meyers, Rebecca; Herzfeld, Judith (2004) Subunit structure of gas vesicles: a MALDI-TOF mass spectrometry study. Biophys J 86:499-505
Maeda, Akio; Herzfeld, Judith; Belenky, Marina et al. (2003) Water-mediated hydrogen-bonded network on the cytoplasmic side of the Schiff base of the L photointermediate of bacteriorhodopsin. Biochemistry 42:14122-9
Petkova, Aneta T; Baldus, Marc; Belenky, Marina et al. (2003) Backbone and side chain assignment strategies for multiply labeled membrane peptides and proteins in the solid state. J Magn Reson 160:1-12
Lansing, Jonathan C; Hu, Jingui G; Belenky, Marina et al. (2003) Solid-state NMR investigation of the buried X-proline peptide bonds of bacteriorhodopsin. Biochemistry 42:3586-93
Rosay, Melanie; Lansing, Jonathan C; Haddad, Kristin C et al. (2003) High-frequency dynamic nuclear polarization in MAS spectra of membrane and soluble proteins. J Am Chem Soc 125:13626-7
Maeda, Akio; Balashov, Sergei P; Lugtenburg, Johan et al. (2002) Interaction of internal water molecules with the schiff base in the L intermediate of the bacteriorhodopsin photocycle. Biochemistry 41:3803-9
Kandori, Hideki; Belenky, Marina; Herzfeld, Judith (2002) Vibrational frequency and dipolar orientation of the protonated Schiff base in bacteriorhodopsin before and after photoisomerization. Biochemistry 41:6026-31
Petkova, Aneta T; Hatanaka, Minoru; Jaroniec, Christopher P et al. (2002) Tryptophan interactions in bacteriorhodopsin: a heteronuclear solid-state NMR study. Biochemistry 41:2429-37
Hatcher, Mary E; Hu, Jingui G; Belenky, Marina et al. (2002) Control of the pump cycle in bacteriorhodopsin: mechanisms elucidated by solid-state NMR of the D85N mutant. Biophys J 82:1017-29
Lansing, Jonathan C; Hohwy, Morten; Jaroniec, Christopher P et al. (2002) Chromophore distortions in the bacteriorhodopsin photocycle: evolution of the H-C14-C15-H dihedral angle measured by solid-state NMR. Biochemistry 41:431-8

Showing the most recent 10 out of 38 publications