The enzyme 3_oxo-delta5-steroid isomerase (KSI) from Pseudomonas testosteroini is an example of a class of enzymes that catalyze reactions proceeding through an enol(ate) intermediate. An understanding of the mechanism of these enzymes has long been the goal of mechanistic enzymologists. Recently, Gerlt and Gassman have postulated that low barrier hydrogen bonds are important in these and other reactions. While their theory may provide the basis for the understanding of a variety of enzymatic reactions, it has not been tested experimentally. Our recent determination of the complete energetic profile of KSI makes it an excellent enzyme with which to test this theory. We will examine the contribution of hydrogen bonding to the stability of both the enzyme- bound intermediate and the transition state(s) for proton transfer. Experiments will include the determination of the complete free energy profiles for a variety of mutants that involve the replacement of the enzyme electrophile Tyr-14 with a series of fluorotyrosines. This work will enable us to determine the Bronsted coefficients for both the internal equilibrium and the kinetic constants. These results will be interpreted in terms of the type of hydrogen bonding that is involved in these processes. In addition, we will examine the free energy profiles for a series of mutants of the phenylalanines at positions 101, 30, 80 and 103. Mutants with amino acids at position 101 (Fl10L, F101A) that are less hydrophobic that Phe have been shown to be much less active than wild type KSI, suggesting that there is also a hydrophobic component to the catalysis by KSI. The free energy profiles for these mutants should allow us to determine the mechanism by which this catalysis occurs.

Agency
National Institute of Health (NIH)
Institute
National Institute of General Medical Sciences (NIGMS)
Type
Research Project (R01)
Project #
2R01GM038155-08
Application #
2179182
Study Section
Biochemistry Study Section (BIO)
Project Start
1987-08-01
Project End
1999-06-30
Budget Start
1995-07-01
Budget End
1996-06-30
Support Year
8
Fiscal Year
1995
Total Cost
Indirect Cost
Name
University of Maryland Baltimore
Department
Chemistry
Type
Schools of Medicine
DUNS #
003255213
City
Baltimore
State
MD
Country
United States
Zip Code
21201
Wilde, Thomas C; Blotny, Grzegorz; Pollack, Ralph M (2008) Experimental evidence for enzyme-enhanced coupled motion/quantum mechanical hydrogen tunneling by ketosteroid isomerase. J Am Chem Soc 130:6577-85
Pollack, Ralph M (2004) Enzymatic mechanisms for catalysis of enolization: ketosteroid isomerase. Bioorg Chem 32:341-53
Petrounia, I P; Blotny, G; Pollack, R M (2000) Binding of 2-naphthols to D38E mutants of 3-oxo-Delta 5-steroid isomerase: variation of ligand ionization state with the nature of the electrophilic component. Biochemistry 39:110-6
Henot, F; Pollack, R M (2000) Catalytic activity of the D38A mutant of 3-oxo-Delta 5-steroid isomerase: recruitment of aspartate-99 as the base. Biochemistry 39:3351-9
Pollack, R M; Thornburg, L D; Wu, Z R et al. (1999) Mechanistic insights from the three-dimensional structure of 3-oxo-Delta(5)-steroid isomerase. Arch Biochem Biophys 370:9-15
Petrounia, I P; Pollack, R M (1998) Substituent effects on the binding of phenols to the D38N mutant of 3-oxo-delta5-steroid isomerase. A probe for the nature of hydrogen bonding to the intermediate. Biochemistry 37:700-5
Thornburg, L D; Henot, F; Bash, D P et al. (1998) Electrophilic assistance by Asp-99 of 3-oxo-Delta 5-steroid isomerase. Biochemistry 37:10499-506
Qi, L; Pollack, R M (1998) Catalytic contribution of phenylalanine-101 of 3-oxo-Delta 5-steroid isomerase. Biochemistry 37:6760-6
Wu, Z R; Ebrahimian, S; Zawrotny, M E et al. (1997) Solution structure of 3-oxo-delta5-steroid isomerase. Science 276:415-8
Zawrotny, M E; Hawkinson, D C; Blotny, G et al. (1996) Mechanism of proton transfer in the isomerization of 5-androstene-3, 17-dione by 3-oxo-delta 5-steroid isomerase and its D38E mutant. Biochemistry 35:6438-42

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