Organs are made up of networks of specialized tube types that have distinct sizes, shapes and functions, with the tiniest (unicellular) tubes being just one cell in diameter. Defects in tube development or maintenance underlie many serious health problems such as kidney disease, heart disease and stroke, so it is important to understand factors that shape and maintain tubes. Despite the fact that unicellular tubes are widespread in the capillary beds that interface with other tissues such as the brain and kidney, very little is known about how unicellular tubes develop or are maintained. To address these issues, we study a set of unicellular tubes in the excretory (renal-like) system of the nematode C. elegant. We identified >100 mutants that affect these unicellular tubes, and we will use them to address three main questions.
Aim 1) How do Ras signaling and the fusogen AFF-1 promote an elongated tube shape? Many unicellular tubes are seamless -they lack junctions along their length - and they adopt elongated or branched shapes. We will test the hypothesis that aff-1 is a key downstream target of Ras signaling for both seamlessness and tube shape control and has a continuous function in a novel pathway for apical membrane addition.
Aim 2) How does the luminal extracellular matrix protect tube integrity? As tubes develop, they secrete various glycoproteins into their lumens. We will test the hypothesis that the Zona Pellucida (ZP) domain protein LET-653 interacts with other gene products we identified to form a luminal matrix scaffold that shapes and protects the lumen during tube morphogenesis, and that unicellular tubes are particularly reliant on such luminal scaffolds for their integrity.
Aim 3) How does Ras signaling promote tube delamination? Some cells within an epithelium can delaminate and give rise to other cell types, and this process is co-opted during tumor cell metastasis. We identified a cell non-autonomous requirement for Ras signaling in delamination. We will test the hypothesis that Ras acts in a common pathway with other genes we've identified that are also required for delamination. Our experiments take advantage of powerful imaging and genetic approaches possible in C. elegant to address central questions about unicellular tubes that are also relevant to the biology of all tubes.

Public Health Relevance

Problems with tube development or maintenance cause birth defects such as spina bifida and many common diseases such as kidney disease, heart disease and stroke. These studies investigate how tubes develop and are maintained, with a special emphasis on the tiniest tubes in our bodies. Understanding these mechanisms will help in the design of therapies to prevent or treat tube-related disease.

Agency
National Institute of Health (NIH)
Institute
National Institute of General Medical Sciences (NIGMS)
Type
Research Project (R01)
Project #
5R01GM058540-17
Application #
9624763
Study Section
Development - 1 Study Section (DEV1)
Program Officer
Hoodbhoy, Tanya
Project Start
2000-04-01
Project End
2021-01-31
Budget Start
2019-02-01
Budget End
2021-01-31
Support Year
17
Fiscal Year
2019
Total Cost
Indirect Cost
Name
University of Pennsylvania
Department
Genetics
Type
Schools of Medicine
DUNS #
042250712
City
Philadelphia
State
PA
Country
United States
Zip Code
19104
Flatt, Kristen M; Beshers, Caroline; Unal, Cagla et al. (2018) Epidermal Remodeling in Caenorhabditis elegans Dauers Requires the Nidogen Domain Protein DEX-1. Genetics :
Soulavie, Fabien; Hall, David H; Sundaram, Meera V (2018) The AFF-1 exoplasmic fusogen is required for endocytic scission and seamless tube elongation. Nat Commun 9:1741
Cohen, Jennifer D; Flatt, Kristen M; Schroeder, Nathan E et al. (2018) Epithelial Shaping by Diverse Apical Extracellular Matrices Requires the Nidogen Domain Protein DEX-1 in Caenorhabditis elegans. Genetics :
Sundaram, Meera V; Cohen, Jennifer D (2017) Time to make the doughnuts: Building and shaping seamless tubes. Semin Cell Dev Biol 67:123-131
Gill, Hasreet K; Cohen, Jennifer D; Ayala-Figueroa, Jesus et al. (2016) Integrity of Narrow Epithelial Tubes in the C. elegans Excretory System Requires a Transient Luminal Matrix. PLoS Genet 12:e1006205
Sundaram, Meera V; Buechner, Matthew (2016) The Caenorhabditis elegans Excretory System: A Model for Tubulogenesis, Cell Fate Specification, and Plasticity. Genetics 203:35-63
Soulavie, Fabien; Sundaram, Meera V (2016) Auto-fusion and the shaping of neurons and tubes. Semin Cell Dev Biol 60:136-145
Parry, Jean M; Sundaram, Meera V (2014) A non-cell-autonomous role for Ras signaling in C. elegans neuroblast delamination. Development 141:4279-84
Sundaram, Meera V (2013) Canonical RTK-Ras-ERK signaling and related alternative pathways. WormBook :1-38
Mancuso, Vincent P; Parry, Jean M; Storer, Luke et al. (2012) Extracellular leucine-rich repeat proteins are required to organize the apical extracellular matrix and maintain epithelial junction integrity in C. elegans. Development 139:979-90

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