When the concentration of the inhibitory neurotransmitter lambda-aminobutyric acid (GABA) diminishes below a threshold level in the brain, convulsions can begin. Increasing the GABA concentration terminates the convulsion. Since GABA does not cross the blood-brain barrier, it cannot be used as an anticonvulsant agent. An alternative approach to increase brain GABA levels has been to inactivate the enzyme that degrades GABA, namely, GABA aminotransferase (GABA-AT); for example, the anticonvulsant drug vigabatrin is used in Europe for the treatment of epilepsy. Another approach, which has not yet been exploited, would be to design a class of compounds that activates the enzyme that catalyzes the conversion of glutamic acid into GABA, namely, L-glutamic acid decarboxylase (GAD). Four areas of research on which this proposal will focus are 1) the design of new inactivators of GABA-AT, 2) the elucidation of the active site peptides to which selected inactivators become attached, 3) the determination of the mechanisms of inactivation of various GABA-AT inactivators, and 4) the design and mechanism of action of L-glutamic acid decarboxylase (GAD) activators. The new inactivators of GABA-AT that will be studied include 4-aminotetrahydrofuran-2-carboxylates and the corresponding tetrahydrothiophene and pyrrolidine analogues, beta-lactam sulfones, alpha-substituted aminomethylphenols and 5-aminomethyl-2-hydroxyisoxazole analogues, and 3-aminopropylphosphonic acid analogues. The active site will be probed with radioactively-labeled lambda-vinyl GABA, lambda-ethynyl GABA, and 4-amino-2-fluoro-2-butenoic acid and the structures of peptides to which these compounds become attached will be determined. The mechanisms of inactivation of GABA-AT by 4-amino-4,5-dihydrofuran-2-carboxylate and the corresponding dihydrothiophene analogue, of beta-chloroalanine hydroxamide, of 3-amino-4-fluorobutanoic acid and the corresponding 4,4-difluoro compound, of 4-amino-2-difluoromethyl-2-butenoic acid, and of lambda-fluorovinyl GABA analogues will be investigated. The cause for activation of L-glutamic acid decarboxylase by various compounds will be investigated, the proposed allosteric site peptides will be determined. and new potential GAD activators will be designed and tested.

Agency
National Institute of Health (NIH)
Institute
National Institute of Neurological Disorders and Stroke (NINDS)
Type
Research Project (R01)
Project #
5R01NS015703-16
Application #
2262879
Study Section
Bio-Organic and Natural Products Chemistry Study Section (BNP)
Project Start
1979-08-01
Project End
1996-07-31
Budget Start
1994-08-01
Budget End
1995-07-31
Support Year
16
Fiscal Year
1994
Total Cost
Indirect Cost
Name
Northwestern University at Chicago
Department
Chemistry
Type
Schools of Arts and Sciences
DUNS #
City
Evanston
State
IL
Country
United States
Zip Code
60201
Wang, Zhiyong; Silverman, Richard B (2004) Synthesis of cyclopropane isosteres of the antiepilepsy drug vigabatrin and evaluation of their inhibition of GABA aminotransferase. J Enzyme Inhib Med Chem 19:293-301
Storici, Paola; De Biase, Daniela; Bossa, Francesco et al. (2004) Structures of gamma-aminobutyric acid (GABA) aminotransferase, a pyridoxal 5'-phosphate, and [2Fe-2S] cluster-containing enzyme, complexed with gamma-ethynyl-GABA and with the antiepilepsy drug vigabatrin. J Biol Chem 279:363-73
Pan, Yue; Calvert, Kristi; Silverman, Richard B (2004) Conformationally-restricted vigabatrin analogs as irreversible and reversible inhibitors of gamma-aminobutyric acid aminotransferase. Bioorg Med Chem 12:5719-25
Fu, Mengmeng; Silverman, Richard B (2004) Inactivation of gamma-aminobutyric acid aminotransferase by (S)-4-amino-4,5-dihydro-2-furancarboxylic acid does not proceed by the expected aromatization mechanism. Bioorg Med Chem Lett 14:203-6
Pan, Yue; Qiu, Jian; Silverman, Richard B (2003) Design, synthesis, and biological activity of a difluoro-substituted, conformationally rigid vigabatrin analogue as a potent gamma-aminobutyric acid aminotransferase inhibitor. J Med Chem 46:5292-3
Choi, Sun; Silverman, Richard B (2002) Inactivation and inhibition of gamma-aminobutyric acid aminotransferase by conformationally restricted vigabatrin analogues. J Med Chem 45:4531-9
Choi, Sun; Storici, Paola; Schirmer, Tilman et al. (2002) Design of a conformationally restricted analogue of the antiepilepsy drug Vigabatrin that directs its mechanism of inactivation of gamma-aminobutyric acid aminotransferase. J Am Chem Soc 124:1620-4
Qiu, J; Silverman, R B (2000) A new class of conformationally rigid analogues of 4-amino-5-halopentanoic acids, potent inactivators of gamma-aminobutyric acid aminotransferase. J Med Chem 43:706-20
Koo, Y K; Nandi, D; Silverman, R B (2000) The multiple active enzyme species of gamma-aminobutyric acid aminotransferase are not isozymes. Arch Biochem Biophys 374:248-54
Qiu, J; Stevenson, S H; O'Beirne, M J et al. (1999) 2,6-Difluorophenol as a bioisostere of a carboxylic acid: bioisosteric analogues of gamma-aminobutyric acid. J Med Chem 42:329-32

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