Cell membranes are central elements in the signal transmission machinery of all higher life forms. It is therefore widely accepted that A? oligomer interactions with membranes play an important role in Alzheimer's pathogenesis. Yet, a molecular understanding of A? neurotoxicity in AD is still missing to date. By the concerted use of biophysical experimentation and theory/simulation, this program project (M. L""""""""sche, Director) will provide molecular-scale information on A? oligomer interaction with membranes, transformations of peptide aggregate states and their impact on membrane nanostructure, and the effect of these factors on membrane embedded ion channels. The program consists of two Cores and three Research Projects. Cores A and B provides resources for the administration of the Program Project (Core A;M. L""""""""sche, PI) and for peptide synthesis and immuno-reagents in the form of oligomer-specific antibodies (Core B: C. G. Glabe, PI). Research Project 1: Electrophysiology of A? Oligomer Interaction with Conductance Mechanisms in Cells and BLMs (J. E. Hall, PI). The Irvine group will measure electrogenic responses of free-standing membranes with well-defined chemical compositions and of cell membranes to A?, and will develop models of the interactions. Project 2: Structural and Functional Investigations of A? Oligomer Interaction with Synthetic Membranes (M. L""""""""sche, PI). Sparsely tethered bilayer lipid membranes (stBLMs) are used to characterize molecular interactions, constitutional changes, and antibody interaction with membrane-bound A? (neutron reflection at NCNR;complementing electrochemical and optical techniques at Carnegie Mellon, CMU). Membrane reconstitution protocols for stBLMs will also be developed and the impact of A? oligomers on membrane-embedded KcsA will be determined. Project 3: Simulation of A? Oligomer Interaction with Membranes (M. Deserno, PI). Coarse-grained simulations of A? oligomers and membranes at CMU will be developed to investigate structural transformations of peptide and aid experimental data interpretation. Collaborations: (1) Membrane Channel Biophysics (J. A. Mindell, PI). The NINDS lab has an active research program on ion channels and will provide know-how on KcsA membrane reconstitution. (2) Electrochemical Spectroscopy of Tethered Bilayers (G. Valincius, PI;Institute of Biochemistry, Vilnius, Lithuania). The group supports the PPG with their expertise in electrochemical impedance spectroscopy (EIS) in a subcontract.

Agency
National Institute of Health (NIH)
Institute
National Institute on Aging (NIA)
Type
Research Program Projects (P01)
Project #
5P01AG032131-03
Application #
8020072
Study Section
Special Emphasis Panel (ZAG1-ZIJ-7 (O2))
Program Officer
Refolo, Lorenzo
Project Start
2009-01-15
Project End
2012-06-30
Budget Start
2011-01-01
Budget End
2012-06-30
Support Year
3
Fiscal Year
2011
Total Cost
$618,830
Indirect Cost
Name
Carnegie-Mellon University
Department
Physics
Type
Schools of Arts and Sciences
DUNS #
052184116
City
Pittsburgh
State
PA
Country
United States
Zip Code
15213
Bereau, Tristan; Wang, Zun-Jing; Deserno, Markus (2014) More than the sum of its parts: coarse-grained peptide-lipid interactions from a simple cross-parametrization. J Chem Phys 140:115101
Gericke, Arne; Leslie, Nicholas R; Lösche, Mathias et al. (2013) PtdIns(4,5)P2-mediated cell signaling: emerging principles and PTEN as a paradigm for regulatory mechanism. Adv Exp Med Biol 991:85-104
Lioudyno, Maria I; Birch, Alexandra M; Tanaka, Brian S et al. (2013) Shaker-related potassium channels in the central medial nucleus of the thalamus are important molecular targets for arousal suppression by volatile general anesthetics. J Neurosci 33:16310-22
Budvytyte, Rima; Valincius, Gintaras; Niaura, Gediminas et al. (2013) Structure and properties of tethered bilayer lipid membranes with unsaturated anchor molecules. Langmuir 29:8645-56
Shenoy, Siddharth S; Nanda, Hirsh; Lösche, Mathias (2012) Membrane association of the PTEN tumor suppressor: electrostatic interaction with phosphatidylserine-containing bilayers and regulatory role of the C-terminal tail. J Struct Biol 180:394-408
Shenoy, Siddharth; Shekhar, Prabhanshu; Heinrich, Frank et al. (2012) Membrane association of the PTEN tumor suppressor: molecular details of the protein-membrane complex from SPR binding studies and neutron reflection. PLoS One 7:e32591
Zan, Goh Haw; Tan, Cheemeng; Deserno, Markus et al. (2012) Hemifusion of giant unilamellar vesicles with planar hydrophobic surfaces: a fluorescence microscopy study. Soft Matter 8:10877-10886
Lioudyno, Maria I; Broccio, Matteo; Sokolov, Yuri et al. (2012) Effect of synthetic aýý peptide oligomers and fluorinated solvents on Kv1.3 channel properties and membrane conductance. PLoS One 7:e35090
Bereau, Tristan; Deserno, Markus; Bachmann, Michael (2011) Structural basis of folding cooperativity in model proteins: insights from a microcanonical perspective. Biophys J 100:2764-72
Yaron, Peter N; Holt, Brian D; Short, Philip A et al. (2011) Single wall carbon nanotubes enter cells by endocytosis and not membrane penetration. J Nanobiotechnology 9:45

Showing the most recent 10 out of 21 publications