There are two overall themes interrelating the four projects. First, the Bevan and Klinman laboratories (projects I and II) will address the developmental basis of T and B cell receptor repertoire expression. Since the repertoire of mature T cell receptors is determined largely by thymic environmental selection, the Bevan laboratory will assess the impact on their fine specificity of T cells developing in the presence of wild type vs mutant MHC molecules. The clonal development of neonatal and adult B cell subsets will be addressed at the molecular level by the Klinman laboratory which will use PCR technology to generate libraries of V region sequences from the genomic DNA of developing B lineage cell clones. The Bevan laboratory, in addressing the tripartite interaction of T cell receptors, peptides, and MHC molecules, and the Klinman laboratory in assessing B cell repertoire diversity, will both participate in the second overall theme, the structure of receptor-antigen interaction and its relationship to repertoire diversity. The Getzoff laboratory will continue its promising analyses of the structure of an Fab fragment of anti cytochrome c antibody and the same Fab in complex with antigen. These studies should provide crucial information concerning the contacts made between antibodies and antigens and the flexibility of interacting molecules. This information serves as the backdrop for the Lerner laboratory, which proposes to continue its pioneering efforts to predict and find antibody combining site structures capable of catalyzing chemical reactions. During the past several years the principle investigators have profited greatly from the common CORE facility made available through this program project and the intellectual interactions the grant has fostered. The present proposal is intended to facilitate the continuation of these interactions.

Agency
National Institute of Health (NIH)
Institute
National Institute of Allergy and Infectious Diseases (NIAID)
Type
Research Program Projects (P01)
Project #
5P01AI019499-10
Application #
3091552
Study Section
Special Emphasis Panel (SRC)
Project Start
1990-04-01
Project End
1995-06-30
Budget Start
1993-07-01
Budget End
1994-06-30
Support Year
10
Fiscal Year
1993
Total Cost
Indirect Cost
Name
Scripps Research Institute
Department
Type
DUNS #
City
La Jolla
State
CA
Country
United States
Zip Code
92037
Mylvaganam, S E; Paterson, Y; Getzoff, E D (1998) Structural basis for the binding of an anti-cytochrome c antibody to its antigen: crystal structures of FabE8-cytochrome c complex to 1.8 A resolution and FabE8 to 2.26 A resolution. J Mol Biol 281:301-22
Mylvaganam, S E; Paterson, Y; Kaiser, K et al. (1991) Biochemical implications from the variable gene sequences of an anti-cytochrome c antibody and crystallographic characterization of its antigen-binding fragment in free and antigen-complexed forms. J Mol Biol 221:455-62
Decker, D J; Boyle, N E; Klinman, N R (1991) Predominance of nonproductive rearrangements of VH81X gene segments evidences a dependence of B cell clonal maturation on the structure of nascent H chains. J Immunol 147:1406-11
Carbone, F R; Bevan, M J (1990) Class I-restricted processing and presentation of exogenous cell-associated antigen in vivo. J Exp Med 171:377-87
Wright, P E; Dyson, H J; Lerner, R A et al. (1990) Antigen-antibody interactions: an NMR approach. Biochem Pharmacol 40:83-8
Heath, W R; Vitiello, A; Sherman, L A (1989) Mapping of epitopes recognized by alloreactive cytotoxic T lymphocytes using inhibition by MHC peptides. J Immunol 143:1441-6
Cooper, H M; Klinman, N R; Paterson, Y (1989) The autoantigenic response to rabbit cytochrome c. Eur J Immunol 19:315-22
Vitiello, A; Heath, W R; Sherman, L A (1989) Consequences of self-presentation of peptide antigen by cytolytic T lymphocytes. J Immunol 143:1512-7
Carbone, F R; Hosken, N A; Moore, M W et al. (1989) Class I MHC-restricted cytotoxic responses to soluble protein antigen. Cold Spring Harb Symp Quant Biol 54 Pt 1:551-5
Hosken, N A; Bevan, M J; Carbone, F R (1989) Class I-restricted presentation occurs without internalization or processing of exogenous antigenic peptides. J Immunol 142:1079-83

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