The goal of the TB Structural Genomics Consortium (TBSGC) is to structurally and functionally characterize proteins that are critical for the growth and survival of mycobacteria. The Chemical and Genefic Core is dedicated to supporting the TBSGC projects by identifying vital proteins and helping to define their functions. The Core will offer several services, aimed at determining whether a protein may be useful as a drug target, and combining high-throughput chemical screening with novel genetic methods to functionally characterize mycobacterial proteins and protein complexes. The Core will generate mycobacterial mutants that conditionally express essential proteins or mutant alleles, in order to validate potential drug targets and assist in functional characterization. The Core will identify interactions of targeted proteins using generic synergy, to identify proteins that act in concert with a target of interest, which may include protein complexes that would in turn be the focus of subsequent structural determination. The Core will determine protein localization in live cells and provide tools to biochemically define protein complexes in vivo. Finally, the Core will identify small molecule inhibitors of targeted proteins by high-throughput screening, which will serve as aids in structure-based functional studies and could be leads for new antibiotic discovery.

Public Health Relevance

The Core will provide critical infrastructure and support to the other projects in this consortium. The TBSGC is unique in prioritizing targets for structure determination based on their relevance to drug discovery. We will take a variety of approaches to identify antibiotic targets and establish their roles in Mycobacterium tuberculosis.

Agency
National Institute of Health (NIH)
Institute
National Institute of Allergy and Infectious Diseases (NIAID)
Type
Research Program Projects (P01)
Project #
1P01AI095208-01A1
Application #
8353062
Study Section
Special Emphasis Panel (ZAI1-JKB-M (M1))
Project Start
Project End
Budget Start
2012-09-01
Budget End
2013-08-31
Support Year
1
Fiscal Year
2012
Total Cost
$501,162
Indirect Cost
$69,985
Name
Texas A&M University
Department
Type
DUNS #
078592789
City
College Station
State
TX
Country
United States
Zip Code
77845
Rittershaus, Emily S C; Baek, Seung-Hun; Krieger, Inna V et al. (2018) A Lysine Acetyltransferase Contributes to the Metabolic Adaptation to Hypoxia in Mycobacterium tuberculosis. Cell Chem Biol 25:1495-1505.e3
Tuukkanen, Anne T; Freire, Diana; Chan, Sum et al. (2018) Structural Variability of EspG Chaperones from Mycobacterial ESX-1, ESX-3, and ESX-5 Type VII Secretion Systems. J Mol Biol :
Pham, Truc V; Murkin, Andrew S; Moynihan, Margaret M et al. (2017) Mechanism-based inactivator of isocitrate lyases 1 and 2 from Mycobacterium tuberculosis. Proc Natl Acad Sci U S A 114:7617-7622
Cheng, Yu-Shan; Sacchettini, James C (2016) Structural Insights into Mycobacterium tuberculosis Rv2671 Protein as a Dihydrofolate Reductase Functional Analogue Contributing to para-Aminosalicylic Acid Resistance. Biochemistry 55:1107-19
Bajaj, R Alexandra; Arbing, Mark A; Shin, Annie et al. (2016) Crystal structure of the toxin Msmeg_6760, the structural homolog of Mycobacterium tuberculosis Rv2035, a novel type II toxin involved in the hypoxic response. Acta Crystallogr F Struct Biol Commun 72:863-869
Wagner, Jonathan M; Chan, Sum; Evans, Timothy J et al. (2016) Structures of EccB1 and EccD1 from the core complex of the mycobacterial ESX-1 type VII secretion system. BMC Struct Biol 16:5
Huang, Hsiao-Ling; Krieger, Inna V; Parai, Maloy K et al. (2016) Mycobacterium tuberculosis Malate Synthase Structures with Fragments Reveal a Portal for Substrate/Product Exchange. J Biol Chem 291:27421-27432
Costa, Diego L; Namasivayam, Sivaranjani; Amaral, Eduardo P et al. (2016) Pharmacological Inhibition of Host Heme Oxygenase-1 Suppresses Mycobacterium tuberculosis Infection In Vivo by a Mechanism Dependent on T Lymphocytes. MBio 7:
Matsui, Toshitaka; Nambu, Shusuke; Goulding, Celia W et al. (2016) Unique coupling of mono- and dioxygenase chemistries in a single active site promotes heme degradation. Proc Natl Acad Sci U S A 113:3779-84
Olive, Andrew J; Sassetti, Christopher M (2016) Metabolic crosstalk between host and pathogen: sensing, adapting and competing. Nat Rev Microbiol 14:221-34

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