Our program, configured as 3 research projects and 2 cores, continues to address the hypothesis that parameters of nuclear structure (chromatin organization and the assembly and activity of nuclear matrix-associated subnuclear sites for transcription) contribute to gene expression that mediates the onset, progression and maintenance of bone cell phenotypic properties required for skeletal development and homeostasis. We are pursuing an integrated, multidisciplinary team approach that combines molecular, cellular, biochemical and in vivo genetic approaches to define mechanisms by which subnuclear organization of nucleic acids and regulatory proteins facilitates integration of physiological signals to support competency for skeletal gene expression and bone development in vivo. Our program has 1) identified, structurally and functionally (in vitro and in vivo) characterized the intranuclear trafficking signal that directs the Runx2 transcription factor to sites within the nucleus where regulatory machinery governing transcription resides; 2) pioneered investigation of functional interrelationships of chromatin structure, nucleosome organization and chromatin remodeling with skeletal gene expression; 3) demonstrated that Runx2 provides a scaffold for assembly of combinatorial components of skeletal gene expression at strategic sites on target gene promoters and in nuclear microenvironments where threshold concentrations of regulatory proteins dynamically configure functional complexes; 4) provided a new dimension to understanding combinatorial mechanisms that mediate skeletal gene expression by facilitating the organization and activity of regulatory networks; and 5) observed the retention of bone phenotype-specific transcription factors at target genes during mitosis and partitioning to progeny cells providing a novel component of epigenetic control for cell fate determination and lineage commitment. We will focus on further defining spatial and temporal organization and assembly of regulatory complexes for skeletal gene expression by identifying target genes dependent on stable complex formation in subnuclear domains and mechanisms supporting retention of competency for skeletal gene expression during mitotic division of osteoprogenitor cells (project 1), the positive and negative regulation of osteoblastogenesis by multimeric complexes with specialized coregulatory factors in nuclear microenvironments (project 2), and the requirements for chromatin remodeling for induction and progression of the osteoblast phenotype in a vitamin D dependent manner (project 3). Relevance: evaluation of nuclear structure-gene expression interrelationships will provide biological validation of regulatory parameters that are obligatory for skeletal development and may be compromised in metabolic bone disease. Our studies will provide insights into components of nuclear organization that can be targeted for innovative therapy.

Agency
National Institute of Health (NIH)
Institute
National Institute of Arthritis and Musculoskeletal and Skin Diseases (NIAMS)
Type
Research Program Projects (P01)
Project #
7P01AR048818-11
Application #
8732813
Study Section
Special Emphasis Panel (ZAR1-EHB-H (M2))
Program Officer
Chen, Faye H
Project Start
2007-08-21
Project End
2014-06-30
Budget Start
2013-07-01
Budget End
2014-06-30
Support Year
11
Fiscal Year
2011
Total Cost
$130,174
Indirect Cost
Name
University of Vermont & St Agric College
Department
Biochemistry
Type
Schools of Medicine
DUNS #
066811191
City
Burlington
State
VT
Country
United States
Zip Code
05405
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Yang, Seungchan; Quaresma, Alexandre J C; Nickerson, Jeffrey A et al. (2015) Subnuclear domain proteins in cancer cells support the functions of RUNX2 in the DNA damage response. J Cell Sci 128:728-40
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Zaidi, Sayyed K; Grandy, Rodrigo A; Lopez-Camacho, Cesar et al. (2014) Bookmarking target genes in mitosis: a shared epigenetic trait of phenotypic transcription factors and oncogenes? Cancer Res 74:420-5
Lopez-Camacho, Cesar; van Wijnen, Andre J; Lian, Jane B et al. (2014) CBF? and the leukemogenic fusion protein CBF?-SMMHC associate with mitotic chromosomes to epigenetically regulate ribosomal genes. J Cell Biochem 115:2155-64
Tai, Phillip W L; Wu, Hai; Gordon, Jonathan A R et al. (2014) Epigenetic landscape during osteoblastogenesis defines a differentiation-dependent Runx2 promoter region. Gene 550:1-9

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