Electron microscope (EM) tomography is now a proven method for the study of cellular architecture at approximately 5nm resolution. We seek to carry out work on the Golgi complex and components of the cytoskeleton and to enable high resolution EM of frozen-hydrated macromolecules. Our CORE research will pursue three technological goals. We will automate tomography, making it convenient to generate 3- D reconstructions of large volumes of cellular structure. This advance will provide both scientists at Boulder and structural biologist elsewhere with the hardware and computational tools that will allow 3-D reconstructions of extensive cellular structures, like cytomembrane systems and parts of the cytoskeleton. We will also work to improve methods for fixation by freeze-substitution and for the labeling of biological macromolecules in well preserved material. Existing methods, such as immunoEM, have important limitations, and while we will use these approaches for some work, we propose four novel approaches to labeling that may improve the resolution, ease, and sensitivity of macromolecular localizations in cells. We will also work to make the modeling of tomograms more objective and efficient, so we can extract reliable information with greater speed, producing data for a quantitative examination of reliable information with greater speed, producing data for a quantitative examination of reliable information with greater speed, producing data for a quantitative examination of variability in cellular fine structure. Each of these advances will help structural cell biology move to a new level of reliability and effectiveness in answering important scientific questions.

Agency
National Institute of Health (NIH)
Institute
National Institute of General Medical Sciences (NIGMS)
Type
Research Program Projects (P01)
Project #
5P01GM061306-03
Application #
6589300
Study Section
Special Emphasis Panel (ZRG1)
Project Start
2002-05-01
Project End
2003-04-30
Budget Start
Budget End
Support Year
3
Fiscal Year
2002
Total Cost
$498,057
Indirect Cost
Name
University of Colorado at Boulder
Department
Type
DUNS #
City
Boulder
State
CO
Country
United States
Zip Code
80309
Gergely, Zachary R; Martinez, Dana E; Donohoe, Bryon S et al. (2018) 3D electron tomographic and biochemical analysis of ER, Golgi and trans Golgi network membrane systems in stimulated Venus flytrap (Dionaea muscipula) glandular cells. J Biol Res (Thessalon) 25:15
Donohoe, Bryon S; Kang, Byung-Ho; Gerl, Mathias J et al. (2013) Cis-Golgi cisternal assembly and biosynthetic activation occur sequentially in plants and algae. Traffic 14:551-67
Zheng, Huiqiong; Staehelin, L Andrew (2011) Protein storage vacuoles are transformed into lytic vacuoles in root meristematic cells of germinating seedlings by multiple, cell type-specific mechanisms. Plant Physiol 155:2023-35
Kang, Byung-Ho; Nielsen, Erik; Preuss, Mary Lai et al. (2011) Electron tomography of RabA4b- and PI-4Kýý1-labeled trans Golgi network compartments in Arabidopsis. Traffic 12:313-29
Segui-Simarro, Jose M; Staehelin, L Andrew (2009) Mitochondrial reticulation in shoot apical meristem cells of Arabidopsis provides a mechanism for homogenization of mtDNA prior to gamete formation. Plant Signal Behav 4:168-71
Karahara, Ichirou; Suda, Jinsuke; Tahara, Hiroshi et al. (2009) The preprophase band is a localized center of clathrin-mediated endocytosis in late prophase cells of the onion cotyledon epidermis. Plant J 57:819-31
Limbach, Christoph; Staehelin, L Andrew; Sievers, Andreas et al. (2008) Electron tomographic characterization of a vacuolar reticulum and of six vesicle types that occupy different cytoplasmic domains in the apex of tip-growing Chara rhizoids. Planta 227:1101-14
Staehelin, L Andrew; Kang, Byung-Ho (2008) Nanoscale architecture of endoplasmic reticulum export sites and of Golgi membranes as determined by electron tomography. Plant Physiol 147:1454-68
Kang, Byung-Ho; Staehelin, L Andrew (2008) ER-to-Golgi transport by COPII vesicles in Arabidopsis involves a ribosome-excluding scaffold that is transferred with the vesicles to the Golgi matrix. Protoplasma 234:51-64
Segui-Simarro, Jose M; Coronado, Maria Jose; Staehelin, L Andrew (2008) The mitochondrial cycle of Arabidopsis shoot apical meristem and leaf primordium meristematic cells is defined by a perinuclear tentaculate/cage-like mitochondrion. Plant Physiol 148:1380-93

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