Chemotaxis, which is characterized by directed movement of cells up a chemical gradient, is a key component in a multitude of biological processes, including neuronal patterning, wound healing, embryogenesis, and angiogenesis. The overall aim of this Program Project is to quantitatively study three distinct stages of chemotaxis in the social amoeba Dictyostelium discoideum using an approach that integrates novel experiments and mathematical modeling. Specifically, we propose to investigate chemotaxis by examining three distinct timescales: 1) Directional sensing: processes that occur on a time scale of 0-10 s and that are characterized by subcellular localization of several key signaling components but do not involve the reorganization of the cytoskeleton. 2) Formation of a stable leading edge and cell polarity: processes that occur on longer timescales (10-45 s) and that lead to cell regions that can clearly be identified as front, back and sides. Polarization can occur in response to a gradient, in which case it is coupled to the gradient sensing process, or can occur spontaneously. 3) Motility: processes that occur after the polarity is established and which include the actual movement of the cell, communication between cells at large distances and the coordinated response of large groups of cells (1-8 minutes). Our approach will rely heavily on the use of microfluidic devices which will provide us with precise control over the chemoattractant stimulus. The goal of our research is to better understand chemotaxis of eukaryotic cells. Advances in this field will benefit diagnosis and treatment of medical problems involving cell migration.

Agency
National Institute of Health (NIH)
Institute
National Institute of General Medical Sciences (NIGMS)
Type
Research Program Projects (P01)
Project #
5P01GM078586-03
Application #
7679688
Study Section
Special Emphasis Panel (ZRG1-CB-G (40))
Program Officer
Deatherage, James F
Project Start
2007-08-15
Project End
2012-07-31
Budget Start
2009-08-01
Budget End
2010-07-31
Support Year
3
Fiscal Year
2009
Total Cost
$1,004,583
Indirect Cost
Name
University of California San Diego
Department
Physics
Type
Schools of Arts and Sciences
DUNS #
804355790
City
La Jolla
State
CA
Country
United States
Zip Code
92093
Yue, Haicen; Camley, Brian A; Rappel, Wouter-Jan (2018) Minimal Network Topologies for Signal Processing during Collective Cell Chemotaxis. Biophys J 114:2986-2999
Camley, Brian A (2018) Collective gradient sensing and chemotaxis: modeling and recent developments. J Phys Condens Matter 30:223001
Tu, Yuhai; Rappel, Wouter-Jan (2018) Adaptation of Living Systems. Annu Rev Condens Matter Phys 9:183-205
Camley, Brian A; Rappel, Wouter-Jan (2017) Physical models of collective cell motility: from cell to tissue. J Phys D Appl Phys 50:
Camley, Brian A; Rappel, Wouter-Jan (2017) Cell-to-cell variation sets a tissue-rheology-dependent bound on collective gradient sensing. Proc Natl Acad Sci U S A 114:E10074-E10082
Rappel, Wouter-Jan; Edelstein-Keshet, Leah (2017) Mechanisms of Cell Polarization. Curr Opin Syst Biol 3:43-53
Camley, Brian A; Zhao, Yanxiang; Li, Bo et al. (2017) Crawling and turning in a minimal reaction-diffusion cell motility model: Coupling cell shape and biochemistry. Phys Rev E 95:012401
Loomis, William F (2016) A better way to discover gene function in the social amoeba Dictyostelium discoideum. Genome Res 26:1161-4
Camley, Brian A; Zimmermann, Juliane; Levine, Herbert et al. (2016) Collective Signal Processing in Cluster Chemotaxis: Roles of Adaptation, Amplification, and Co-attraction in Collective Guidance. PLoS Comput Biol 12:e1005008
Rappel, Wouter-Jan (2016) Cell-cell communication during collective migration. Proc Natl Acad Sci U S A 113:1471-3

Showing the most recent 10 out of 58 publications