Erythropoiesis is driven by an intrinsic transcriptional program that is modified by chromatin factors.? Homozygous mutant moonshine mutants are severely anemic and have a complete block in erythroid? differentiation at the proerythroblast level. We recently demonstrated that the gene that is defective in the? zebrafish moonshine mutant is the transcriptional intermediary factor 1 gamma (TIF1gamma). The TIF1 family has? multiple domains including a PhD finger, ring finger and bromo domain, and are thought to bridge DNA? binding proteins to other chromatin factors. One published role for TIFs is to modulate transcription? regulation by nuclear receptors. TIF1gamma is localized to novel nuclear bodies, and to date no signaling factors? have been found to interact with TIF1gamma during erythropoiesis. Recently TIF1gamma has been shown to interact? with SMAD factors and regulate epithelial fate during early embryogenesis in frogs, establishing a hypothesis? that TGFbeta signaling is abnormal is moonshine mutants. Here we plan to do an extensive characterization of? gene expression in moonshine mutants. We plan to sort erythroid progenitors at the onset of the moonshine? phenotype, and compare gene expression profiles to wildtype cells, and to other hemtopoietic mutants. The? effect of overexpression of TIF1gamma will be evaluated in zebrafish embryos. We plan to use chromatin? immunoprecipitation as a method to find targets of TIF1gamma, and will purify TIF1gamma associated proteins using an? in vivo biotinylation and streptavidin purification strategy. Particular attention will be given to SMAD factors? that might interact with TIF1gamma in erythroid cells at a genetic level. Targeted lesion detection will be used in? zebrafish to find an allelic series of moonshine mutants, with mutations in every functional domain of? moonshine. Finally, we will undertake a suppressor screen for zebrafish mutants that modify the moonshine? phenotype. This should lead to a better understanding of the pathways that moonshine controls, and will? have an impact on diseases such as sickle cell anemia and thalassemia.

Agency
National Institute of Health (NIH)
Institute
National Heart, Lung, and Blood Institute (NHLBI)
Type
Research Program Projects (P01)
Project #
5P01HL032262-27
Application #
7652273
Study Section
Heart, Lung, and Blood Initial Review Group (HLBP)
Project Start
Project End
Budget Start
2008-07-01
Budget End
2009-06-30
Support Year
27
Fiscal Year
2008
Total Cost
$333,355
Indirect Cost
Name
Children's Hospital Boston
Department
Type
DUNS #
076593722
City
Boston
State
MA
Country
United States
Zip Code
02115
Clement, Kendell; Farouni, Rick; Bauer, Daniel E et al. (2018) AmpUMI: design and analysis of unique molecular identifiers for deep amplicon sequencing. Bioinformatics 34:i202-i210
Liu, Frances D; Tam, Kimberley; Pishesha, Novalia et al. (2018) Improving hematopoietic recovery through modeling and modulation of the mesenchymal stromal cell secretome. Stem Cell Res Ther 9:268
Huang, Nai-Jia; Lin, Ying-Cing; Lin, Chung-Yueh et al. (2018) Enhanced phosphocholine metabolism is essential for terminal erythropoiesis. Blood 131:2955-2966
Schoonenberg, Vivien A C; Cole, Mitchel A; Yao, Qiuming et al. (2018) CRISPRO: identification of functional protein coding sequences based on genome editing dense mutagenesis. Genome Biol 19:169
Lessard, Samuel; Beaudoin, Mélissa; Orkin, Stuart H et al. (2018) 14q32 and let-7 microRNAs regulate transcriptional networks in fetal and adult human erythroblasts. Hum Mol Genet 27:1411-1420
Esrick, Erica B; Bauer, Daniel E (2018) Genetic therapies for sickle cell disease. Semin Hematol 55:76-86
Yien, Yvette Y; Shi, Jiahai; Chen, Caiyong et al. (2018) FAM210B is an erythropoietin target and regulates erythroid heme synthesis by controlling mitochondrial iron import and ferrochelatase activity. J Biol Chem 293:19797-19811
Wattrus, Samuel J; Zon, Leonard I (2018) Stem cell safe harbor: the hematopoietic stem cell niche in zebrafish. Blood Adv 2:3063-3069
Uenishi, Gene I; Jung, Ho Sun; Kumar, Akhilesh et al. (2018) NOTCH signaling specifies arterial-type definitive hemogenic endothelium from human pluripotent stem cells. Nat Commun 9:1828
Yu, Shan-He; Zhu, Kang-Yong; Zhang, Fan et al. (2018) The histone demethylase Jmjd3 regulates zebrafish myeloid development by promoting spi1 expression. Biochim Biophys Acta Gene Regul Mech 1861:106-116

Showing the most recent 10 out of 215 publications