Core D: Genetic Modification Core. Diabetes research is commonly conducted by comparing various functions in model organisms, including mice, following the introduction of specific alterations into the genome. The DRC Genetic Modification Core leverages a number of institutional facilities to provide a cost-effective, shared resource for the facile genetic modification of cells and animals needed for DRC investigators to complete studies relevant to type 1 and type 2 diabetes. Purpose: The Genetic Modification Core offers services that enable DRC researchers to: 1. generate complex targeting vectors for conventional knock-ins/knock-outs, genome-editing tools such as TALEN and CRISPR/Cas9, and standard lentiviral-mediated gene transfers. 2. modify ES or other cells with such vectors. 3. characterize and expand genetically modified cell lines. 4. deliver modified ES cells to blastocysts and generate modified mice lines. 5. inject fertilized eggs with TALEN and CRISPR/Cas9 for direct in vivo genome editing. 5. use transgenic methods to create genetically modified mice. 6. assist investigators with the optimal storage of, recovery of, and transfer of modified mouse lines. Benefits to DRC Community: The Genetic Modification Core enables access of DRC researchers to technologies and expertise that would require years to replicate within individual laboratories. In the past 2 years, the facilities that comprise the DRC Genetic Modification Core assisted 77 investigators from 35 DRC laboratories with an average of 269 procedures annually. 61 different currently active projects totaling $15,903,865 annual direct costs ($10,694,539 from NIH sources) have benefited through these efforts. The DRC Genetic Modification Core coordinates multiple UCSF facilities that provide these technically challenging services to DRC researchers. The DRC Core lowers barriers to enable the use of these necessary capabilities by DRC researchers. The DRC Core also provides feedback and resources to the component facilities so that they evolve to meet the emerging genetic modification needs of DRC researchers. Technology Development: All DRC Cores interact with DRC members to define service needs to be developed by Core Staff. The DRC Executive Committee selects proposals that meet emerging needs by DRC members. Within the past funding period, DRC support has developed the Core's ability to generate both knock-ins and transgenics in non-obese diabetes (NOD) mouse background, lentivirus-based methods for transgenesis, and TALEN and CRISPR/Cas9-directed modifications in a variety of model organisms including mice, flies and worms. This support for the development of new technologies within the Core thus ensures that DRC investigators have cost-effective access to the most up-to-date genetic modification tools they require.

Agency
National Institute of Health (NIH)
Institute
National Institute of Diabetes and Digestive and Kidney Diseases (NIDDK)
Type
Center Core Grants (P30)
Project #
2P30DK063720-11
Application #
8874798
Study Section
Special Emphasis Panel (ZDK1-GRB-S (J4))
Project Start
Project End
Budget Start
2015-04-01
Budget End
2016-03-31
Support Year
11
Fiscal Year
2015
Total Cost
$149,055
Indirect Cost
$54,940
Name
University of California San Francisco
Department
Type
DUNS #
094878337
City
San Francisco
State
CA
Country
United States
Zip Code
94143
Alba, Diana L; Farooq, Jeffrey A; Lin, Matthew Y C et al. (2018) Subcutaneous Fat Fibrosis Links Obesity to Insulin Resistance in Chinese Americans. J Clin Endocrinol Metab 103:3194-3204
Paruthiyil, Sreenivasan; Hagiwara, Shin-Ichiro; Kundassery, Keshav et al. (2018) Sexually dimorphic metabolic responses mediated by CRF2 receptor during nutritional stress in mice. Biol Sex Differ 9:49
Masand, Ruchi; Paulo, Esther; Wu, Dongmei et al. (2018) Proteome Imbalance of Mitochondrial Electron Transport Chain in Brown Adipocytes Leads to Metabolic Benefits. Cell Metab 27:616-629.e4
McQueen, Allison E; Koliwad, Suneil K; Wang, Jen-Chywan (2018) Fighting obesity by targeting factors regulating beige adipocytes. Curr Opin Clin Nutr Metab Care 21:437-443
Ali, Niwa; Zirak, Bahar; Truong, Hong-An et al. (2018) Skin-Resident T Cells Drive Dermal Dendritic Cell Migration in Response to Tissue Self-Antigen. J Immunol 200:3100-3108
Puri, Sapna; Roy, Nilotpal; Russ, Holger A et al. (2018) Replication confers ? cell immaturity. Nat Commun 9:485
Corbit, Kevin C; Camporez, João Paulo G; Edmunds, Lia R et al. (2018) Adipocyte JAK2 Regulates Hepatic Insulin Sensitivity Independently of Body Composition, Liver Lipid Content, and Hepatic Insulin Signaling. Diabetes 67:208-221
Mocciaro, Annamaria; Roth, Theodore L; Bennett, Hayley M et al. (2018) Light-activated cell identification and sorting (LACIS) for selection of edited clones on a nanofluidic device. Commun Biol 1:41
Miranda, Diego A; Krause, William C; Cazenave-Gassiot, Amaury et al. (2018) LRH-1 regulates hepatic lipid homeostasis and maintains arachidonoyl phospholipid pools critical for phospholipid diversity. JCI Insight 3:
Greenstein, R A; Jones, Stephen K; Spivey, Eric C et al. (2018) Noncoding RNA-nucleated heterochromatin spreading is intrinsically labile and requires accessory elements for epigenetic stability. Elife 7:

Showing the most recent 10 out of 531 publications