RESEARCH PLAN: VISION BIOSTATISTICS MODULE OVERVIEW The Vision Biostatistics Module will provide statistical expertise for the vision research community at UCSD. To date, each investigator has managed its data and analysis resources independently, often duplicating resources and expertise. Moreover, each investigator has not had adequate capability to acquire sufficient statistical resources to bring their research to the next level of productivity and sophistication. The Vision Biostatistics Module will provide statistical analyses and consultation to investigators of both clinical and experimental studies towards a common goal of improving the research productivity and expanding collaboration in the vision research community at UCSD. The staff senior biostatistician, the first to reside at the Department of Ophthalmology, will enhance the research capabilities of each investigator by providing dedicated statistical consultation and analyses for vision researchers. Currently, each investigator either has a collaborative relationship with an outside statistician or completes the statistical analysis himself or through students and/or postdoctoral fellows. Most often the consultant biostatistician is involved in a very limited part-time capacity, limiting his/her ability to develop an in-depth understanding of vision-specific analysis issues and to keep abreast of recent advancements in the field. There are several common analysis themes and statistical issues that can be addressed effectively and efficiently by having a dedicated biostatistician familiar with eye research to analyze vision related data. For example, there are statistical issues and novel methods that can be used to address the analysis of longitudinal imaging data of subjects/animals with two (non-independent) eyes contributing to the analysis. In addition, most of the grants (both human and animal) using this module utilize imaging instruments such as spectral domain optical coherence tomography to provide measures of retinal structure. These instruments provide a large amount of correlated measurements and summary parameters that must be analyzed efficiently with appropriate statistical models. The biostatistician in this module will become familiar with these summary measures and analytic challenges they represent which in turn will serve as a resource to other modules using these technologies. The familiarity of a dedicated statistician with vision research data should greatly enhance productivity over time as it will remove the time-consuming steps of explaining the data structure to outside statisticians. Finally, utilizing genetic, imaging and functional data to predict the development or progression of various eye diseases involves sophisticated prediction modeling techniques that are similar across grants.

Agency
National Institute of Health (NIH)
Institute
National Eye Institute (NEI)
Type
Center Core Grants (P30)
Project #
5P30EY022589-03
Application #
8689049
Study Section
Special Emphasis Panel (ZEY1-VSN)
Project Start
Project End
Budget Start
2014-07-01
Budget End
2015-06-30
Support Year
3
Fiscal Year
2014
Total Cost
$183,191
Indirect Cost
$65,003
Name
University of California San Diego
Department
Type
DUNS #
804355790
City
La Jolla
State
CA
Country
United States
Zip Code
92093
Christopher, Mark; Belghith, Akram; Weinreb, Robert N et al. (2018) Retinal Nerve Fiber Layer Features Identified by Unsupervised Machine Learning on Optical Coherence Tomography Scans Predict Glaucoma Progression. Invest Ophthalmol Vis Sci 59:2748-2756
Kroeger, Heike; Grimsey, Neil; Paxman, Ryan et al. (2018) The unfolded protein response regulator ATF6 promotes mesodermal differentiation. Sci Signal 11:
Christopher, Mark; Belghith, Akram; Bowd, Christopher et al. (2018) Performance of Deep Learning Architectures and Transfer Learning for Detecting Glaucomatous Optic Neuropathy in Fundus Photographs. Sci Rep 8:16685
You, Qi Sheng; Gaber, Raouf; Meshi, Amit et al. (2018) HIGH-DOSE HIGH-FREQUENCY AFLIBERCEPT FOR RECALCITRANT NEOVASCULAR AGE-RELATED MACULAR DEGENERATION. Retina 38:1156-1165
Bowd, Christopher; Zangwill, Linda M; Weinreb, Robert N et al. (2018) Racial Differences in Rate of Change of Spectral-Domain Optical Coherence Tomography-Measured Minimum Rim Width and Retinal Nerve Fiber Layer Thickness. Am J Ophthalmol 196:154-164
Ju, Won-Kyu; Shim, Myoung Sup; Kim, Keun-Young et al. (2018) Ubiquinol promotes retinal ganglion cell survival and blocks the apoptotic pathway in ischemic retinal degeneration. Biochem Biophys Res Commun 503:2639-2645
Chekuri, Anil; Guru, Aditya A; Biswas, Pooja et al. (2018) IFT88 mutations identified in individuals with non-syndromic recessive retinal degeneration result in abnormal ciliogenesis. Hum Genet 137:447-458
Hou, Huiyuan; Moghimi, Sasan; Zangwill, Linda M et al. (2018) Inter-eye Asymmetry of Optical Coherence Tomography Angiography Vessel Density in Bilateral Glaucoma, Glaucoma Suspect, and Healthy Eyes. Am J Ophthalmol 190:69-77
Ramkumar, Hema L; Nguyen, Brian; Bartsch, Dirk-Uwe et al. (2018) REDUCED GANGLION CELL VOLUME ON OPTICAL COHERENCE TOMOGRAPHY IN PATIENTS WITH GEOGRAPHIC ATROPHY. Retina 38:2159-2167
Hou, Huiyuan; Shoji, Takuhei; Zangwill, Linda M et al. (2018) Progression of Primary Open-Angle Glaucoma in Diabetic and Nondiabetic Patients. Am J Ophthalmol 189:1-9

Showing the most recent 10 out of 266 publications