This subproject is one of many research subprojects utilizing the resources provided by a Center grant funded by NIH/NCRR. The subproject and investigator (PI) may have received primary funding from another NIH source, and thus could be represented in other CRISP entries. The institution listed is for the Center, which is not necessarily the institution for the investigator. Tomographic reconstruction of frozen-hydrated biological samples, embedded in amorphous ice, is a powerful method for the study of cell structure in its initially native condition. However, few biological samples are less than 0.5 micrometers along the beam axis, thin enough to be viewed in their entirety with 300 KeV electrons. It is therefore important to develop methods for slicing cells while they are frozen. A diamond knife in a good cryo-ultramicrotome can cut the desired sections without warming them to temperatures at which amorphous ice will crystallize, but stable diamond knives are thick (the angle included at the knife edge is 25-35 degrees), so the amorphous ice is usually compressed and sharply bent by the cutting process. To solve these problems we are investigating the use of carbon nanotubes (CNTs) as devices that could be used as tight wires to sever thin slices from a block of vitrified biological material. Single walled CNTs have a radius of about 1 nm, less then the curvature at the edge of a sharp diamond knife. CNTs can be millimeters long and are known to be strong, but how strong relative to amorphous ice remains to be determined. We have examined commercially obtained and homegrown CNTs in a scanning electron microscope, disentangled from their neighbors by micromanipulation. We stretch them over a thin loop of tungsten wire and have developed a 'welding' process that forms a strong bond between the CNT and the tungsten. We are working to streamline this process so it can be used to make useful numbers of CNT-based cutting devices. We are also experimenting with devices that can measure the hardness and viscosity of vitreous ice, so we can understand the physical requirements for the microtomy we plan.

Agency
National Institute of Health (NIH)
Institute
National Center for Research Resources (NCRR)
Type
Biotechnology Resource Grants (P41)
Project #
2P41RR000592-36
Application #
7354977
Study Section
Special Emphasis Panel (ZRG1-CB-J (40))
Project Start
2006-09-26
Project End
2007-07-31
Budget Start
2006-09-26
Budget End
2007-07-31
Support Year
36
Fiscal Year
2006
Total Cost
$9,371
Indirect Cost
Name
University of Colorado at Boulder
Department
Biochemistry
Type
Schools of Arts and Sciences
DUNS #
007431505
City
Boulder
State
CO
Country
United States
Zip Code
80309
Giddings Jr, Thomas H; Morphew, Mary K; McIntosh, J Richard (2017) Preparing Fission Yeast for Electron Microscopy. Cold Spring Harb Protoc 2017:
Zhao, Xiaowei; Schwartz, Cindi L; Pierson, Jason et al. (2017) Three-Dimensional Structure of the Ultraoligotrophic Marine Bacterium ""Candidatus Pelagibacter ubique"". Appl Environ Microbiol 83:
Brown, Joanna R; Schwartz, Cindi L; Heumann, John M et al. (2016) A detailed look at the cytoskeletal architecture of the Giardia lamblia ventral disc. J Struct Biol 194:38-48
Saheki, Yasunori; Bian, Xin; Schauder, Curtis M et al. (2016) Control of plasma membrane lipid homeostasis by the extended synaptotagmins. Nat Cell Biol 18:504-15
Höög, Johanna L; Lacomble, Sylvain; Bouchet-Marquis, Cedric et al. (2016) 3D Architecture of the Trypanosoma brucei Flagella Connector, a Mobile Transmembrane Junction. PLoS Negl Trop Dis 10:e0004312
Park, J Genevieve; Palmer, Amy E (2015) Properties and use of genetically encoded FRET sensors for cytosolic and organellar Ca2+ measurements. Cold Spring Harb Protoc 2015:pdb.top066043
McCoy, Kelsey M; Tubman, Emily S; Claas, Allison et al. (2015) Physical limits on kinesin-5-mediated chromosome congression in the smallest mitotic spindles. Mol Biol Cell 26:3999-4014
Höög, Johanna L; Lötvall, Jan (2015) Diversity of extracellular vesicles in human ejaculates revealed by cryo-electron microscopy. J Extracell Vesicles 4:28680
Marc, Robert E; Anderson, James R; Jones, Bryan W et al. (2014) The AII amacrine cell connectome: a dense network hub. Front Neural Circuits 8:104
Weber, Britta; Tranfield, Erin M; Höög, Johanna L et al. (2014) Automated stitching of microtubule centerlines across serial electron tomograms. PLoS One 9:e113222

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