Synchrotron radiation is ideally suited for measuring the highest resolution data from protein crystals. Such data have utility in accurately defining the structural parameters of macromolecules. It is generally believed that resolution can be improved over conventional sources by a few tenths or even as much as 1.0 _ by using synchrotron radiation, especially when combined with crystal freezing. During the past year, MacCHESS has begun to explore ultra-high resolution (better than 1.2_) data collection. We have identified almost 50 proteins that diffract to true atomic resolution. Ultra-high resolution data have utility in refining protein structures without introducing geometrical restraints and in the direct phasing (without heavy atoms or anomalous scatterers) of macromolecular X-ray data. Thus far we have collected data for celluase E2 (1.0 _), concanvalin A (0.9_), xylan esterase (0.8_) and monoclinic lysozyme (1.0 _). In the case of xylan esterase, the data will be used for direct phasing in collaboration with Herb Hauptman and coworkers in Buffalo. The other data is being used for high resolution refinements. The data sets mentioned above were collected using mostly routine procedures. In the future, we will explore modified data collection schemes, such as phi slicing, to improve the signal to noise ratio. We will also develop new data processing procedures including improved profile fitting methods, improved background estimations and improved scaling procedures. We will also explore the effects of beam size, crystal size, X-ray energy and others in producing the best high resolution data.

Agency
National Institute of Health (NIH)
Institute
National Center for Research Resources (NCRR)
Type
Biotechnology Resource Grants (P41)
Project #
5P41RR001646-14
Application #
5223537
Study Section
Project Start
Project End
Budget Start
Budget End
Support Year
14
Fiscal Year
1996
Total Cost
Indirect Cost
Kozlov, Guennadi; Wong, Kathy; Gehring, Kalle (2018) Crystal structure of the Legionella effector Lem22. Proteins 86:263-267
Ménade, Marie; Kozlov, Guennadi; Trempe, Jean-François et al. (2018) Structures of ubiquitin-like (Ubl) and Hsp90-like domains of sacsin provide insight into pathological mutations. J Biol Chem 293:12832-12842
Xu, Jie; Kozlov, Guennadi; McPherson, Peter S et al. (2018) A PH-like domain of the Rab12 guanine nucleotide exchange factor DENND3 binds actin and is required for autophagy. J Biol Chem 293:4566-4574
Dean, Dexter N; Rana, Pratip; Campbell, Ryan P et al. (2018) Propagation of an A? Dodecamer Strain Involves a Three-Step Mechanism and a Key Intermediate. Biophys J 114:539-549
Chen, Yu Seby; Kozlov, Guennadi; Fakih, Rayan et al. (2018) The cyclic nucleotide-binding homology domain of the integral membrane protein CNNM mediates dimerization and is required for Mg2+ efflux activity. J Biol Chem 293:19998-20007
Xu, Caishuang; Kozlov, Guennadi; Wong, Kathy et al. (2016) Crystal Structure of the Salmonella Typhimurium Effector GtgE. PLoS One 11:e0166643
Cogliati, Massimo; Zani, Alberto; Rickerts, Volker et al. (2016) Multilocus sequence typing analysis reveals that Cryptococcus neoformans var. neoformans is a recombinant population. Fungal Genet Biol 87:22-9
Oot, Rebecca A; Kane, Patricia M; Berry, Edward A et al. (2016) Crystal structure of yeast V1-ATPase in the autoinhibited state. EMBO J 35:1694-706
Lucido, Michael J; Orlando, Benjamin J; Vecchio, Alex J et al. (2016) Crystal Structure of Aspirin-Acetylated Human Cyclooxygenase-2: Insight into the Formation of Products with Reversed Stereochemistry. Biochemistry 55:1226-38
Bauman, Joseph D; Harrison, Jerry Joe E K; Arnold, Eddy (2016) Rapid experimental SAD phasing and hot-spot identification with halogenated fragments. IUCrJ 3:51-60

Showing the most recent 10 out of 375 publications