This subproject is one of many research subprojects utilizing theresources provided by a Center grant funded by NIH/NCRR. The subproject andinvestigator (PI) may have received primary funding from another NIH source,and thus could be represented in other CRISP entries. The institution listed isfor the Center, which is not necessarily the institution for the investigator.Importin b is the best characterized nuclear import receptor, which import cytoplasmic protein into the cell nucleus. The majority of cytoplasmic import substrates are imported by importin b in complex with the adaptor importin a, in a reaction which requires GTP hydrolysis by the small GTPase Ran. snRNP represents a specialized subset of import cargos that are imported into the nucleus by importin b in complex with the specific adaptor snurportin. We have biochemical mapped the minimum Importin b-Binding domain in Snurportin (sIBB), which spans region 1-68 of the protein, and obtained crystals of human importin b (876 residues) bound to the sIBB(res 1-68). These crystals were obtained under high ammonium sulphate and diffract X-rays to ~1.8A. In the structure only region 25-68 of the sIBB is visible in the electron density, which is bound to importin b via hydrophobic interactions (likely stabilized by the high ammonium sulphate). In contrast region 1-24 of the sIBB, also important for high affinity binding, is not visible in our crystal, likely due to the high ionic strength of the crystallization solution (~1.5M Ammonium Sulphate). In the attempt to visualize the entire sIBB-domain (res. 1-68), we have obtained crystals of importin b:sIBB at physiological ionic strength (~175mM NaCl). Preliminary diffraction analysis in house indicates these crystals also diffract X-rays to high resolution. The goal of this quick access proposal is to obtain beam-time at A1 (or F1) and carry out a complete data collection from our new crystal form. Given the unit cell size, space group (P212121) and the high diffraction quality of the crystals in hand, complete data set can be measured usually within 2-3 hours. If we had 24 hours of beamtime we could collect complete x-ray data from 5-6 crystals. Even 12-hours would be - in principle- sufficient. So the beam-time requested is minimal (12-24 hours).

Agency
National Institute of Health (NIH)
Institute
National Center for Research Resources (NCRR)
Type
Biotechnology Resource Grants (P41)
Project #
2P41RR001646-26
Application #
7721292
Study Section
Special Emphasis Panel (ZRG1-BCMB-E (40))
Project Start
2008-08-01
Project End
2009-06-30
Budget Start
2008-08-01
Budget End
2009-06-30
Support Year
26
Fiscal Year
2008
Total Cost
$152,746
Indirect Cost
Name
Cornell University
Department
Chemistry
Type
Schools of Arts and Sciences
DUNS #
872612445
City
Ithaca
State
NY
Country
United States
Zip Code
14850
Kozlov, Guennadi; Wong, Kathy; Gehring, Kalle (2018) Crystal structure of the Legionella effector Lem22. Proteins 86:263-267
Ménade, Marie; Kozlov, Guennadi; Trempe, Jean-François et al. (2018) Structures of ubiquitin-like (Ubl) and Hsp90-like domains of sacsin provide insight into pathological mutations. J Biol Chem 293:12832-12842
Xu, Jie; Kozlov, Guennadi; McPherson, Peter S et al. (2018) A PH-like domain of the Rab12 guanine nucleotide exchange factor DENND3 binds actin and is required for autophagy. J Biol Chem 293:4566-4574
Dean, Dexter N; Rana, Pratip; Campbell, Ryan P et al. (2018) Propagation of an A? Dodecamer Strain Involves a Three-Step Mechanism and a Key Intermediate. Biophys J 114:539-549
Chen, Yu Seby; Kozlov, Guennadi; Fakih, Rayan et al. (2018) The cyclic nucleotide-binding homology domain of the integral membrane protein CNNM mediates dimerization and is required for Mg2+ efflux activity. J Biol Chem 293:19998-20007
Xu, Caishuang; Kozlov, Guennadi; Wong, Kathy et al. (2016) Crystal Structure of the Salmonella Typhimurium Effector GtgE. PLoS One 11:e0166643
Cogliati, Massimo; Zani, Alberto; Rickerts, Volker et al. (2016) Multilocus sequence typing analysis reveals that Cryptococcus neoformans var. neoformans is a recombinant population. Fungal Genet Biol 87:22-9
Oot, Rebecca A; Kane, Patricia M; Berry, Edward A et al. (2016) Crystal structure of yeast V1-ATPase in the autoinhibited state. EMBO J 35:1694-706
Lucido, Michael J; Orlando, Benjamin J; Vecchio, Alex J et al. (2016) Crystal Structure of Aspirin-Acetylated Human Cyclooxygenase-2: Insight into the Formation of Products with Reversed Stereochemistry. Biochemistry 55:1226-38
Bauman, Joseph D; Harrison, Jerry Joe E K; Arnold, Eddy (2016) Rapid experimental SAD phasing and hot-spot identification with halogenated fragments. IUCrJ 3:51-60

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