This subproject is one of many research subprojects utilizing theresources provided by a Center grant funded by NIH/NCRR. The subproject andinvestigator (PI) may have received primary funding from another NIH source,and thus could be represented in other CRISP entries. The institution listed isfor the Center, which is not necessarily the institution for the investigator.The clustering of neurotransmitter receptors at the postsynaptic terminals is a critical requirement for efficient neurotransmission and neuronal communication. This process is facilitated by adaptor proteins, which bridge the postsynaptic receptors and the underlying cytoskeleton. We have previously determined and reported the structure of one such molecule, the GABAA receptor associated protein, GABARAP, which links GABAA receptors to microtubules (Coyle et al., Neuron, 33(1):63-74, 2002). It was recently shown that GABARAP (a.k.a. Apg8) is lapidated by an ubiquitination-like system involving an E1-like protein (Apg7) and an E2-like protein (Apg3). This lipidation process provides a mechanism for dynamic regulation of the sub-cellular location of GABARAP. We have now obtained crystals of Apg7 and of the Apg7/Apg3 complex. Both Apg3 and Apg7 are novel proteins and are not predicted to share significant structural homologies with proteins of known structure. These structures, therefore, will be of great interest because they will lead to a better understanding of the molecular mechanisms of protein lipidation in eukaryotes. Our crystals of the Apg7/Apg3 complex are very small and diffract only to approximately 8-10 resolution on our home X-ray equipment, but the Apg7 crystals are large and diffract to around 4 . We have also produced Se-methionine modified Apg7 and have obtained derivative crystals which diffract as well as the native ones. We, therefore, request time on CHESS beamline F2 to determine the Apg7 structure using the MAD method. We will also collect native data from the Apg7/Apg3 complex crystals. The Apg7 crystals belong to the P321 space group with a=b=170 , c=160 . The protein is 65 kDa and contains 10 methionines.

Agency
National Institute of Health (NIH)
Institute
National Center for Research Resources (NCRR)
Type
Biotechnology Resource Grants (P41)
Project #
2P41RR001646-26
Application #
7721329
Study Section
Special Emphasis Panel (ZRG1-BCMB-E (40))
Project Start
2008-08-01
Project End
2009-06-30
Budget Start
2008-08-01
Budget End
2009-06-30
Support Year
26
Fiscal Year
2008
Total Cost
$16,812
Indirect Cost
Name
Cornell University
Department
Chemistry
Type
Schools of Arts and Sciences
DUNS #
872612445
City
Ithaca
State
NY
Country
United States
Zip Code
14850
Kozlov, Guennadi; Wong, Kathy; Gehring, Kalle (2018) Crystal structure of the Legionella effector Lem22. Proteins 86:263-267
Ménade, Marie; Kozlov, Guennadi; Trempe, Jean-François et al. (2018) Structures of ubiquitin-like (Ubl) and Hsp90-like domains of sacsin provide insight into pathological mutations. J Biol Chem 293:12832-12842
Xu, Jie; Kozlov, Guennadi; McPherson, Peter S et al. (2018) A PH-like domain of the Rab12 guanine nucleotide exchange factor DENND3 binds actin and is required for autophagy. J Biol Chem 293:4566-4574
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Chen, Yu Seby; Kozlov, Guennadi; Fakih, Rayan et al. (2018) The cyclic nucleotide-binding homology domain of the integral membrane protein CNNM mediates dimerization and is required for Mg2+ efflux activity. J Biol Chem 293:19998-20007
Xu, Caishuang; Kozlov, Guennadi; Wong, Kathy et al. (2016) Crystal Structure of the Salmonella Typhimurium Effector GtgE. PLoS One 11:e0166643
Cogliati, Massimo; Zani, Alberto; Rickerts, Volker et al. (2016) Multilocus sequence typing analysis reveals that Cryptococcus neoformans var. neoformans is a recombinant population. Fungal Genet Biol 87:22-9
Oot, Rebecca A; Kane, Patricia M; Berry, Edward A et al. (2016) Crystal structure of yeast V1-ATPase in the autoinhibited state. EMBO J 35:1694-706
Lucido, Michael J; Orlando, Benjamin J; Vecchio, Alex J et al. (2016) Crystal Structure of Aspirin-Acetylated Human Cyclooxygenase-2: Insight into the Formation of Products with Reversed Stereochemistry. Biochemistry 55:1226-38
Bauman, Joseph D; Harrison, Jerry Joe E K; Arnold, Eddy (2016) Rapid experimental SAD phasing and hot-spot identification with halogenated fragments. IUCrJ 3:51-60

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