THE AIM OF THIS RESEARCH IS TO ADDRESS FUNCTIONAL ISSUES IN PROTEIN-NUCLEIC ACID INTERACTIONS, INITIALLY USING A WELL STUDIED LAMBDA CRO-OPERATOR COMPLEX AS OUR MODEL SYSTEM. CRO IS THE SMALLEST REPRESSOR OF KNOWN STRUCTURE. THE THREE-DIMENSIONAL STRUCTURE OF THIS COMPLEX IS KNOWN; HOWEVER, THE RESOLUTION OF THE X-RAY DATA IS INSUFFICIENT TO ELUCIDATE THE SPECIFIC MECHANISM BY WHICH THE PROTEIN BINDS TO THE OPERATOR DNA. 15N NMR EXPERIMENTS WITH THIS COMPLEX WILL SERVE TWO FUNCTIONS. THE RESULTS WILL GIVE NEW STRUCTURAL INFORMATION ON THIS PROTEIN-DNA COMPLEX, AND PROVIDE DATA ON WHICH TO BASE PREDICTIONS FOR OTHER LESS WELL CHARACTERIZED PROTEIN-DNA COMPLEXES. THE SIR HAS SUPPLIED DR. EDWARDS WITH MORE THAN 3 GRAMS OF 2-DEOXY-[7-15N]GUANOSINE PHOSPHORAMIDITE. THESE HAVE BEEN USED IN THE SYNTHESIS OF THE 17 BASE-PAIR CRO OPERATOR SEQUENCE IN WHICH EACH GUANOSINE HAS BEEN INDIVIDUALLY LABELED. THIS IS AN ONGOING PROJECT.

Agency
National Institute of Health (NIH)
Institute
National Center for Research Resources (NCRR)
Type
Biotechnology Resource Grants (P41)
Project #
3P41RR002231-12S1
Application #
3723121
Study Section
Project Start
Project End
Budget Start
Budget End
Support Year
12
Fiscal Year
1996
Total Cost
Indirect Cost
Name
Los Alamos National Lab
Department
Type
DUNS #
City
Los Alamos
State
NM
Country
United States
Zip Code
87545
Martinez, Rodolfo A; Glass, David R; Ortiz, Erick G et al. (2014) Synthesis of isotopically labeled 1,3-dithiane. J Labelled Comp Radiopharm 57:338-41
Martinez, Rodolfo A; Glass, David R; Ortiz, Erick G et al. (2013) Large-scale preparation of (13) C-labeled 2-(phenylthio)acetic acid and the corresponding labeled sulfoxides and sulfones. J Labelled Comp Radiopharm 56:31-5
Creager, Melinda S; Jenkins, Janelle E; Thagard-Yeaman, Leigh A et al. (2010) Solid-state NMR comparison of various spiders' dragline silk fiber. Biomacromolecules 11:2039-43
Jenkins, Janelle E; Creager, Melinda S; Lewis, Randolph V et al. (2010) Quantitative Correlation between the protein primary sequences and secondary structures in spider dragline silks. Biomacromolecules 11:192-200
Kim, Sun Hee; Aznar, Constantino; Brynda, Marcin et al. (2004) An EPR, ESEEM, structural NMR, and DFT study of a synthetic model for the covalently ring-linked tyrosine-histidine structure in the heme-copper oxidases. J Am Chem Soc 126:2328-38
Ollivault-Shiflett, Morgane; Kimball, David B; Silks, L A Pete (2004) Synthesis of chiral 13C,77Se-labeled selones. J Org Chem 69:5150-2
Schmidt, Bryan; Hillier, Warwick; McCracken, John et al. (2004) The use of stable isotopes and spectroscopy to investigate the energy transducing function of cytochrome c oxidase. Biochim Biophys Acta 1655:248-55
Schmidt, Bryan; McCracken, John; Ferguson-Miller, Shelagh (2003) A discrete water exit pathway in the membrane protein cytochrome c oxidase. Proc Natl Acad Sci U S A 100:15539-42
Gray, Chandele R; Sanz-Cervera, Juan F; Silks, Louis A et al. (2003) Studies on the biosynthesis of asperparaline A: origin of the spirosuccinimde ring system. J Am Chem Soc 125:14692-3
Van Dien, Stephen J; Strovas, Tim; Lidstrom, Mary E (2003) Quantification of central metabolic fluxes in the facultative methylotroph methylobacterium extorquens AM1 using 13C-label tracing and mass spectrometry. Biotechnol Bioeng 84:45-55

Showing the most recent 10 out of 72 publications