Introduction: Phase contrast velocity data can be used to compute motion and deformation of a myocardial region. We present a method that uses a global spatiotemporal finite element model to improve the reproducibility of the computation while retain high accuracy, as compared to a local computation method. Methods and Results: We consider a partition of a large myocardial region with non-overlappingtime-varying basic mesh elements. Nodal points of the mesh covering the region are selected at a reference state. These material points and corresponding spatiotemporal trajectories define the time-varying domain of each mesh element. Within each element, we model the kinematics using finite element shape functions. In implementation, with a reference state mesh configuration defined by the user, and initial estimates of the subsequent mesh configurations obtained by independent tracking of node points, we iteratively refine the mesh configuration estimates by fitting the velocity data to the spatiotemporal finite element model. Reproducibility of the computed quantities can be analyzed after after each computation. In a validation study, we synthesized a 2-D nonuniform deformation data set with an apprent SNR of 45. We computed the motion and deformation quantities from analyzing a single triangular mesh element in case 1 and analyzing an extended mesh configuration that consisted of the same element plus three additional neighboring elements of compariable size in case 2. Repeating the data synthesis and analysis 1000 times for mean and standard deviation measurements showed that the averages of the estimated quantities were in excellent agreement with the true values in both cases. Comparing the results for the same mesh element in the two cases indicated that the extended mesh modeling resulted in lower standard deviation but comparably high accuracy. Summary and Conclusion: Analyzing a single element domain with the present method and the previous local method have about the same reproducibility. With the present method, extending the finite element mesh by adding more triangular elements achieves increasing reproducibility. At the same time, due to the piecewise parameterization, high estimation accuracy, comparable to that of the local method, can still be obtained.

Agency
National Institute of Health (NIH)
Institute
National Center for Research Resources (NCRR)
Type
Biotechnology Resource Grants (P41)
Project #
5P41RR009784-04
Application #
6282982
Study Section
Project Start
1998-01-01
Project End
1998-12-31
Budget Start
1997-10-01
Budget End
1998-09-30
Support Year
4
Fiscal Year
1998
Total Cost
Indirect Cost
Name
Stanford University
Department
Type
DUNS #
800771545
City
Stanford
State
CA
Country
United States
Zip Code
94305
Maclaren, Julian; Aksoy, Murat; Ooi, Melvyn B et al. (2018) Prospective motion correction using coil-mounted cameras: Cross-calibration considerations. Magn Reson Med 79:1911-1921
Guo, Jia; Holdsworth, Samantha J; Fan, Audrey P et al. (2018) Comparing accuracy and reproducibility of sequential and Hadamard-encoded multidelay pseudocontinuous arterial spin labeling for measuring cerebral blood flow and arterial transit time in healthy subjects: A simulation and in vivo study. J Magn Reson Imaging 47:1119-1132
Taviani, Valentina; Alley, Marcus T; Banerjee, Suchandrima et al. (2017) High-resolution diffusion-weighted imaging of the breast with multiband 2D radiofrequency pulses and a generalized parallel imaging reconstruction. Magn Reson Med 77:209-220
Uecker, Martin; Lustig, Michael (2017) Estimating absolute-phase maps using ESPIRiT and virtual conjugate coils. Magn Reson Med 77:1201-1207
Kogan, Feliks; Hargreaves, Brian A; Gold, Garry E (2017) Volumetric multislice gagCEST imaging of articular cartilage: Optimization and comparison with T1rho. Magn Reson Med 77:1134-1141
Aksoy, Murat; Maclaren, Julian; Bammer, Roland (2017) Prospective motion correction for 3D pseudo-continuous arterial spin labeling using an external optical tracking system. Magn Reson Imaging 39:44-52
Tamir, Jonathan I; Uecker, Martin; Chen, Weitian et al. (2017) T2 shuffling: Sharp, multicontrast, volumetric fast spin-echo imaging. Magn Reson Med 77:180-195
Lai, Lillian M; Cheng, Joseph Y; Alley, Marcus T et al. (2017) Feasibility of ferumoxytol-enhanced neonatal and young infant cardiac MRI without general anesthesia. J Magn Reson Imaging 45:1407-1418
Bian, W; Tranvinh, E; Tourdias, T et al. (2016) In Vivo 7T MR Quantitative Susceptibility Mapping Reveals Opposite Susceptibility Contrast between Cortical and White Matter Lesions in Multiple Sclerosis. AJNR Am J Neuroradiol 37:1808-1815
Vos, Sjoerd B; Aksoy, Murat; Han, Zhaoying et al. (2016) Trade-off between angular and spatial resolutions in in vivo fiber tractography. Neuroimage 129:117-132

Showing the most recent 10 out of 446 publications