This subproject is one of many research subprojects utilizing the resources provided by a Center grant funded by NIH/NCRR. The subproject and investigator (PI) may have received primary funding from another NIH source, and thus could be represented in other CRISP entries. The institution listed is for the Center, which is not necessarily the institution for the investigator. For both DEER (double electron?electron resonance) and extended-coverage ELDOR at 95GHz, a method of dual-stepped-frequency operation is desired. The ability to conduct DEER investigations is important because there is significant biological motivation in expanding distance measurement techniques developed at conventional frequencies at ACERT to the high frequency regime. The unique ACERT 2D-FT ESR 95GHz 1kW pulse ESR spectrometer holds the promise of being able to access a wide range of samples including macroscopically-aligned biological specimens, single-crystals with goniometry, and microliter-sized samples. The enhanced orientation selection of high-field ESR spectrum is valuable in structural studies, with both DQC and DEER techniques presently under consideration for this purpose. The implementation of DEER requires, however, irradiating spin systems sequentially at two frequencies. Extended-coverage ELDOR at 95GHz may be accomplished by either field-jump or frequency-stepping techniques, but the desirability of making DEER distance measurements at 95GHz gives us added incentive to implement a dual-frequency capability in order to address both types of experimental work. For our high-power 95GHz pulse spectrometer, the addition of stepped-frequency operation is facilitated by the ca 500 MHz instantaneous bandwidth of the existing transceiver/power amplifier chain. Moreover, the transceiver reference oscillator section in our instrument was designed with an external input which directly accommodates an external dual-frequency source. Consequently, adding an external system for stepped-frequency work is straightforward. Our realization of the external dual-frequency system is based on a fixed reference PLDRO at the nominal 95GHz center frequency, plus a synthesized offset providing, after SSB conversion and multiplication, a 95 ? up to 0.4 GHz signal at the transceiver's output port. A 10ns microwave switch is employed in the frequency reference module to rapidly select either frequency source, with shaping of the actual millimeter-wave pulses performed within the transceiver following frequency multiplication. Timing for the frequency selection switching is provided by a spare output line from our existing 95GHz spectrometer high-resolution (PBHR) timing system. Design of the external dual-frequency source is complete and the components, including the frequency-specific PLDRO, have been ordered and received. Construction, evaluation and experimental use of the step-frequency source is scheduled for this summer.

Agency
National Institute of Health (NIH)
Institute
National Center for Research Resources (NCRR)
Type
Biotechnology Resource Grants (P41)
Project #
5P41RR016292-10
Application #
8172101
Study Section
Special Emphasis Panel (ZRG1-BCMB-K (40))
Project Start
2010-09-01
Project End
2011-08-31
Budget Start
2010-09-01
Budget End
2011-08-31
Support Year
10
Fiscal Year
2010
Total Cost
$12,027
Indirect Cost
Name
Cornell University
Department
Chemistry
Type
Schools of Arts and Sciences
DUNS #
872612445
City
Ithaca
State
NY
Country
United States
Zip Code
14850
Jain, Rinku; Vanamee, Eva S; Dzikovski, Boris G et al. (2014) An iron-sulfur cluster in the polymerase domain of yeast DNA polymerase ?. J Mol Biol 426:301-8
Pratt, Ashley J; Shin, David S; Merz, Gregory E et al. (2014) Aggregation propensities of superoxide dismutase G93 hotspot mutants mirror ALS clinical phenotypes. Proc Natl Acad Sci U S A 111:E4568-76
Georgieva, Elka R; Borbat, Peter P; Ginter, Christopher et al. (2013) Conformational ensemble of the sodium-coupled aspartate transporter. Nat Struct Mol Biol 20:215-21
Airola, Michael V; Sukomon, Nattakan; Samanta, Dipanjan et al. (2013) HAMP domain conformers that propagate opposite signals in bacterial chemoreceptors. PLoS Biol 11:e1001479
Airola, Michael V; Huh, Doowon; Sukomon, Nattakan et al. (2013) Architecture of the soluble receptor Aer2 indicates an in-line mechanism for PAS and HAMP domain signaling. J Mol Biol 425:886-901
Sun, Yan; Zhang, Ziwei; Grigoryants, Vladimir M et al. (2012) The internal dynamics of mini c TAR DNA probed by electron paramagnetic resonance of nitroxide spin-labels at the lower stem, the loop, and the bulge. Biochemistry 51:8530-41
Smith, Andrew K; Freed, Jack H (2012) Dynamics and ordering of lipid spin-labels along the coexistence curve of two membrane phases: an ESR study. Chem Phys Lipids 165:348-61
Yu, Renyuan Pony; Darmon, Jonathan M; Hoyt, Jordan M et al. (2012) High-Activity Iron Catalysts for the Hydrogenation of Hindered, Unfunctionalized Alkenes. ACS Catal 2:1760-1764
Gaffney, Betty J; Bradshaw, Miles D; Frausto, Stephen D et al. (2012) Locating a lipid at the portal to the lipoxygenase active site. Biophys J 103:2134-44
Dzikovski, Boris; Tipikin, Dmitriy; Freed, Jack (2012) Conformational distributions and hydrogen bonding in gel and frozen lipid bilayers: a high frequency spin-label ESR study. J Phys Chem B 116:6694-706

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