This proposal describes genetic and biochemical studies designed to understand how eukaryotic organisms respond to hazardous chemicals found at Superfund sites and aimed at development of a sensitive yeast growth assay that signals the presence of environmental toxins. These studies will utilizes the fission yeast Schizosaccharomyces pombe. Fission yeast has served as an outstanding model system in studies of the cellular responses to genotoxic and cytotoxic agents. Recent studies of fission yeast have uncovered the stress-activated protein kinase (SAPK) Spc1 and transcription factors Pap1 and Atf1 that resemble stress response factors in higher eukaryotes. These proteins regulate the transcriptional induction of stress response genes. DNA microarray technologies, combined with the genome sequence of S. pombe, provide the opportunity to develop a comprehensive picture of the transcriptional response to stress in fission yeast.
The Specific Aims are: (1) Decipher pathways that control the transcriptional response to oxidative stress. Transcriptional regulation of a small group of oxidative stress genes will be analyzed in response to various agents and in different genetic backgrounds. Regulation of the transcription factors Atf1 and Pap1 by stress-activated protein kinases (SAPKs) will be elucidated. (2) Identify all oxidative stress genes in fission yeast. Microarrays containing DNA sequences from all fission yeast genes will be available in the near future. Expression profiling will be performed in response to oxidative stress agents and in different genetic backgrounds. (3) Establish the physiological importance of oxidative stress-response mechanisms. Genes transcriptionally induced by oxidative stress will be disrupted. Physiological consequences of single and multiple mutants that will be evaluated. (4) Develop yeast strains that are biosensors for environmental toxins will be developed and tested with a range of toxins.

Agency
National Institute of Health (NIH)
Institute
National Institute of Environmental Health Sciences (NIEHS)
Type
Hazardous Substances Basic Research Grants Program (NIEHS) (P42)
Project #
3P42ES010337-03S1
Application #
6667484
Study Section
Special Emphasis Panel (ZES1)
Project Start
2002-04-01
Project End
2003-03-31
Budget Start
Budget End
Support Year
3
Fiscal Year
2002
Total Cost
$175,014
Indirect Cost
Name
University of California San Diego
Department
Type
DUNS #
077758407
City
La Jolla
State
CA
Country
United States
Zip Code
92093
Hsu, Po-Kai; Takahashi, Yohei; Munemasa, Shintaro et al. (2018) Abscisic acid-independent stomatal CO2 signal transduction pathway and convergence of CO2 and ABA signaling downstream of OST1 kinase. Proc Natl Acad Sci U S A 115:E9971-E9980
Dhar, Debanjan; Antonucci, Laura; Nakagawa, Hayato et al. (2018) Liver Cancer Initiation Requires p53 Inhibition by CD44-Enhanced Growth Factor Signaling. Cancer Cell 33:1061-1077.e6
Febbraio, Mark A; Reibe, Saskia; Shalapour, Shabnam et al. (2018) Preclinical Models for Studying NASH-Driven HCC: How Useful Are They? Cell Metab :
Fujiwara, Ryoichi; Yoda, Emiko; Tukey, Robert H (2018) Species differences in drug glucuronidation: Humanized UDP-glucuronosyltransferase 1 mice and their application for predicting drug glucuronidation and drug-induced toxicity in humans. Drug Metab Pharmacokinet 33:9-16
Hartmann, Phillipp; Hochrath, Katrin; Horvath, Angela et al. (2018) Modulation of the intestinal bile acid/farnesoid X receptor/fibroblast growth factor 15 axis improves alcoholic liver disease in mice. Hepatology 67:2150-2166
Ganguly, Abantika; Guo, Lan; Sun, Lingling et al. (2018) Tdp1 processes chromate-induced single-strand DNA breaks that collapse replication forks. PLoS Genet 14:e1007595
Tripathi, Anupriya; Debelius, Justine; Brenner, David A et al. (2018) The gut-liver axis and the intersection with the microbiome. Nat Rev Gastroenterol Hepatol 15:397-411
Chen, Shujuan; Tukey, Robert H (2018) Humanized UGT1 Mice, Regulation of UGT1A1, and the Role of the Intestinal Tract in Neonatal Hyperbilirubinemia and Breast Milk-Induced Jaundice. Drug Metab Dispos 46:1745-1755
Desai, Archita P; Mohan, Prashanthinie; Roubal, Anne M et al. (2018) Geographic Variability in Liver Disease-Related Mortality Rates in the United States. Am J Med 131:728-734
Ajmera, Veeral; Park, Charlie C; Caussy, Cyrielle et al. (2018) Magnetic Resonance Imaging Proton Density Fat Fraction Associates With Progression of Fibrosis in Patients With Nonalcoholic Fatty Liver Disease. Gastroenterology 155:307-310.e2

Showing the most recent 10 out of 404 publications