. The overall goal of this continuation project is the discovery of new agents against Pneumocystis carinii and Toxoplasma gondii, two of the opportunistic pathogens known to be major causes of morbidity and mortality in patients with acquired immunodeficiency syndrome (AIDS) and AIDS related complex (ARC). More specifically, the project will focus on the design and synthesis of di and tricyclic diaminopyrimidine derivatives that are expected to have not only the high potency of trimetrexate (TMQ) and piritrexim (PTX) but also the favorable binding selectivity of tremethoprim (TMP) and pyrimethamine (PM) for P. carinii and T. gondii dihydrofolate reductase (DHFR) as opposed to mammalian DHFR. Compounds proposed for synthesis include six general types of 6/6 and 6/5 fused diaminopyrimidine systems, with emphasis being placed initially on compounds with a short bridge (no more than two atoms) and either 3,4,5 trimethoxy substitution (as in TMQ and TMP) or 2,5 dimethoxy substitution (as in PTX). The synthetic schemes are general enough to allow preparation of congeners with other ring substituents, including for example halogens. Target compounds will be evaluated for the ability to inhibit DHFR from P. carinii, T. gondii, and mammalian (rat liver) cells, and those that show a promising selectivity and potency will be tested as inhibitors or human DHFR and the growth of CCRF CEM human lymphoblasts. Compounds may also be tested, when appropriate, for the ability to inhibit P. carinii and T. gondii growth in feeder cultures of rat lung fibroblasts. Compounds with sufficient activity and selectivity in these in vitro assays to justify further preclinical development will be identified as candidates for scaled up synthesis, so as to eventually enable in vivo pharmacological and toxicological studies in mice and other animals to be carried out. The in vitro studies using P. carinii, T. gondii, and rat liver DHFR, as well as the assays using intact parasites in culture, will continue to be done collaboratively with Dr. Sherry Queener, of the Department of Pharmacology & Toxicology, Indiana University School of Medicine. The in vitro assays using human DHFR and human cells in culture will be performed at the Dana Farber as part of the applicant's other currently funded work in the antifolate area.

Agency
National Institute of Health (NIH)
Institute
National Institute of Allergy and Infectious Diseases (NIAID)
Type
Research Project (R01)
Project #
2R01AI029904-06
Application #
2065307
Study Section
AIDS and Related Research Study Section 4 (ARRD)
Project Start
1990-06-01
Project End
1998-05-31
Budget Start
1995-06-01
Budget End
1996-05-31
Support Year
6
Fiscal Year
1995
Total Cost
Indirect Cost
Name
Dana-Farber Cancer Institute
Department
Type
DUNS #
149617367
City
Boston
State
MA
Country
United States
Zip Code
02215
Cody, Vivian; Pace, Jim; Chisum, Kim et al. (2006) New insights into DHFR interactions: analysis of Pneumocystis carinii and mouse DHFR complexes with NADPH and two highly potent 5-(omega-carboxy(alkyloxy) trimethoprim derivatives reveals conformational correlations with activity and novel parallel ring s Proteins 65:959-69
Chan, David C M; Fu, Hongning; Forsch, Ronald A et al. (2005) Design, synthesis, and antifolate activity of new analogues of piritrexim and other diaminopyrimidine dihydrofolate reductase inhibitors with omega-carboxyalkoxy or omega-carboxy-1-alkynyl substitution in the side chain. J Med Chem 48:4420-31
Chan, David C M; Rosowsky, Andre (2005) Synthesis of the lipophilic antifolate piritrexim via a palladium(0)-catalyzed cross-coupling reaction. J Org Chem 70:1364-8
Forsch, Ronald A; Queener, Sherry F; Rosowsky, Andre (2004) Preliminary in vitro studies on two potent, water-soluble trimethoprim analogues with exceptional species selectivity against dihydrofolate reductase from Pneumocystis carinii and Mycobacterium avium. Bioorg Med Chem Lett 14:1811-5
Rosowsky, Andre; Forsch, Ronald A; Sibley, Carol Hopkins et al. (2004) New 2,4-diamino-5-(2',5'-substituted benzyl)pyrimidines as potential drugs against opportunistic infections of AIDS and other immune disorders. Synthesis and species-dependent antifolate activity. J Med Chem 47:1475-86
Rosowsky, Andre; Fu, Hongning; Chan, David C M et al. (2004) Synthesis of 2,4-diamino-6-[2'-O-(omega-carboxyalkyl)oxydibenz[b,f]azepin-5-yl]methylpteridines as potent and selective inhibitors of Pneumocystis carinii, Toxoplasma gondii, and Mycobacterium avium dihydrofolate reductase. J Med Chem 47:2475-85
Rosowsky, Andre; Chen, Han; Fu, Hongning et al. (2003) Synthesis of new 2,4-Diaminopyrido[2,3-d]pyrimidine and 2,4-Diaminopyrrolo[2,3-d]pyrimidine inhibitors of Pneumocystis carinii, Toxoplasma gondii, and Mycobacterium avium dihydrofolate reductase. Bioorg Med Chem 11:59-67
Rosowsky, Andre; Forsch, Ronald A; Queener, Sherry F (2003) Further studies on 2,4-diamino-5-(2',5'-disubstituted benzyl)pyrimidines as potent and selective inhibitors of dihydrofolate reductases from three major opportunistic pathogens of AIDS. J Med Chem 46:1726-36
Cody, Vivian; Galitsky, Nikolai; Luft, Joseph R et al. (2002) Structure-based enzyme inhibitor design: modeling studies and crystal structure analysis of Pneumocystis carinii dihydrofolate reductase ternary complex with PT653 and NADPH. Acta Crystallogr D Biol Crystallogr 58:946-54
Rosowsky, Andre; Forsch, Ronald A; Queener, Sherry F (2002) Inhibition of Pneumocystis carinii, Toxoplasma gondii, and Mycobacterium avium dihydrofolate reductases by 2,4-diamino-5-[2-methoxy-5-(omega-carboxyalkyloxy)benzyl]pyrimidines: marked improvement in potency relative to trimethoprim and species selectivity J Med Chem 45:233-41

Showing the most recent 10 out of 23 publications