We propose additional studies extending our genetic analysis of the HRAS1 minisatellite and its potential role in carcinogenesis. We will continue our family association studies by conducting an analysis of rare HRAS1 allele sharing in sib pairs affected with cancers of the breast, colon, lung, and bladder. Patients with melanoma and acute leukemia will also be recruited. To facilitate the collection of a large number of pairs, we have established a collaboration with the twenty-three member institutions of a clinical trials consortium, the Eastern Cooperative Oncology Group. We also wish to investigate the process of minisatellite mutation at HRAS1 to accumulate evidence for our hypothesis that new mutations interfere with transcriptional regulation of nearby genes. For this purpose we will first determine directly, through single-cell typing methods, the mutation rate of the HRAS1 minisatellite. We expect to confirm our preliminary observation of a discrepancy between the rates of mutation and of locus heterozygosity, thus providing important genetic evidence for negative selection of some mutations. We will also analyze the size distribution of mutations about the common progenitor allele, a1, to investigate the basis for the striking absence of mutations smaller than a1 in our large population database. Once again, the demonstration of a class of """"""""forbidden"""""""" mutations would be strong evidence of a pathogenetic role for the minisatellite. We will characterize the mutations for sites of deletion/insertion, donor sequences, presence or absence of interhomologue exchange, etc. to obtain information on how minisatellite structural changes occur and how such changes can result in the allelic variation of functional activity we have recently described. Finally, we will screen candidate loci for function as minisatellite mutator genes in appropriately chosen transgenic and mutant mouse strains. We anticipate that, in addition to testing the hypothesis that mutations of the HRAS1 minisatellite can have adverse functional consequences, these studies will provide important insights into mechanisms underlying minisatellite instability.

Agency
National Institute of Health (NIH)
Institute
National Cancer Institute (NCI)
Type
Research Project (R01)
Project #
2R01CA045052-07
Application #
3188039
Study Section
Genetics Study Section (GEN)
Project Start
1986-08-01
Project End
1996-06-30
Budget Start
1993-07-01
Budget End
1994-06-30
Support Year
7
Fiscal Year
1993
Total Cost
Indirect Cost
Name
Tufts University
Department
Type
DUNS #
City
Boston
State
MA
Country
United States
Zip Code
02111
Beaulieu, M; Larson, G P; Geller, L et al. (2001) PCR candidate region mismatch scanning: adaptation to quantitative, high-throughput genotyping. Nucleic Acids Res 29:1114-24
Ding, S; Larson, G P; Foldenauer, K et al. (1999) Distinct mutation patterns of breast cancer-associated alleles of the HRAS1 minisatellite locus. Hum Mol Genet 8:515-21
Larson, G P; Zhang, G; Ding, S et al. (1997) An allelic variant at the ATM locus is implicated in breast cancer susceptibility. Genet Test 1:165-70
Devlin, B; Risch, N; Roeder, K (1994) Comments on the statistical aspects of the NRC's report on DNA typing. J Forensic Sci 39:28-40
Green, M; Krontiris, T G (1993) Allelic variation of reporter gene activation by the HRAS1 minisatellite. Genomics 17:429-34
Devlin, B; Risch, N; Roeder, K (1993) Statistical evaluation of DNA fingerprinting: a critique of the NRC's report. Science 259:748-9, 837
Devlin, B; Krontiris, T; Risch, N (1993) Population genetics of the HRAS1 minisatellite locus. Am J Hum Genet 53:1298-305
Trepicchio, W L; Krontiris, T G (1993) IGH minisatellite suppression of USF-binding-site- and E mu-mediated transcriptional activation of the adenovirus major late promoter. Nucleic Acids Res 21:977-85
Krontiris, T G; Devlin, B; Karp, D D et al. (1993) An association between the risk of cancer and mutations in the HRAS1 minisatellite locus. N Engl J Med 329:517-23
Devlin, B; Risch, N (1993) Physical properties of VNTR data, and their impact on a test of allelic independence. Am J Hum Genet 53:324-9

Showing the most recent 10 out of 21 publications