Epstein-Barr virus (EBV) is a human lymphotropic herpesvirus causally associated with epithelial and lymphoproliferative malignancies including Burkitt's lymphoma, nasopharyngeal carcinoma and AIDS-associated lymphoma. Immunosuppressed hosts have greater levels of detectable lytic EBV replication and greater viral loads. The mechanism of action of lytic replication genes is therefore important in understanding the dynamics of EBV infection. Some EBV lytic genes such as EBV SM, the subject of this study, have no human homologues and are therefore also attractive therapeutic targets. Moreover, EBV lytic proteins have extensive interactions with host genes, both regulating their expression and modulating their function. Understanding these interactions is likely to yield insights into the requirements for virus replication and persistence as well as fundamental aspects of cell growth and post-transcriptional gene regulation. EBV SM is an essential gene expressed early in EBV lytic replication that has both activating and inhibitory post-transcriptional effects on EBV and cell gene expression. SM physically interacts with cell proteins that carry out RNA processing and export functions. SM stabilizes mRNA and facilitates export of mRNA from specific EBV target genes and inhibits expression of many spliced genes, but also increases expression of a small number of spliced cellular genes. The cellular genes most highly induced by SM are members of a family of interferon-stimulated genes (ISGs). This proposal has four main objectives: The first is to determine the function of four cytoplasmic ISGs induced by SM which are likely to be important in the host response to viral infection. The second is to determine how SM increases mRNA levels in a gene-specific manner, and delineate its effects on EBV lytic gene expression. The third is to determine which cellular RNA processing proteins SM interacts with to inhibit splicing and alter splice-site selection. The last is to determine the mechanism of action and cellular function of a PML body protein known as Sp110b, which SM induces, binds to, and synergizes with to activate gene expression.

Agency
National Institute of Health (NIH)
Institute
National Cancer Institute (NCI)
Type
Research Project (R01)
Project #
5R01CA081133-07
Application #
6881313
Study Section
Special Emphasis Panel (ZRG1-AARR-B (03))
Program Officer
Daschner, Phillip J
Project Start
1999-04-01
Project End
2009-05-31
Budget Start
2005-06-01
Budget End
2006-05-31
Support Year
7
Fiscal Year
2005
Total Cost
$261,900
Indirect Cost
Name
University of Florida
Department
Internal Medicine/Medicine
Type
Schools of Medicine
DUNS #
969663814
City
Gainesville
State
FL
Country
United States
Zip Code
32611
Church, Trenton Mel; Verma, Dinesh; Thompson, Jacob et al. (2018) Efficient Translation of Epstein-Barr Virus (EBV) DNA Polymerase Contributes to the Enhanced Lytic Replication Phenotype of M81 EBV. J Virol 92:
Swaminathan, Sankar; Schlaberg, Robert; Lewis, Julia et al. (2016) Fatal Zika Virus Infection with Secondary Nonsexual Transmission. N Engl J Med 375:1907-1909
Verma, Dinesh; Thompson, Jacob; Swaminathan, Sankar (2016) Spironolactone blocks Epstein-Barr virus production by inhibiting EBV SM protein function. Proc Natl Acad Sci U S A 113:3609-14
Thompson, Jacob; Verma, Dinesh; Li, DaJiang et al. (2016) Identification and Characterization of the Physiological Gene Targets of the Essential Lytic Replicative Epstein-Barr Virus SM Protein. J Virol 90:1206-21
Verma, Dinesh; Li, Da-Jiang; Krueger, Brian et al. (2015) Identification of the physiological gene targets of the essential lytic replicative Kaposi's sarcoma-associated herpesvirus ORF57 protein. J Virol 89:1688-702
Li, Da-Jiang; Verma, Dinesh; Mosbruger, Tim et al. (2014) CTCF and Rad21 act as host cell restriction factors for Kaposi's sarcoma-associated herpesvirus (KSHV) lytic replication by modulating viral gene transcription. PLoS Pathog 10:e1003880
Verma, Dinesh; Kim, Eun A; Swaminathan, Sankar (2013) Cell-based screening assay for antiviral compounds targeting the ability of herpesvirus posttranscriptional regulatory proteins to stabilize viral mRNAs. J Virol 87:10742-51
Li, Da-Jiang; Verma, Dinesh; Swaminathan, Sankar (2012) Binding of cellular export factor REF/Aly by Kaposi's sarcoma-associated herpesvirus (KSHV) ORF57 protein is not required for efficient KSHV lytic replication. J Virol 86:9866-74
Verma, Dinesh; Bais, Swarna; Gaillard, Melusine et al. (2010) Epstein-Barr Virus SM protein utilizes cellular splicing factor SRp20 to mediate alternative splicing. J Virol 84:11781-9
Han, Zhao; Verma, Dinesh; Hilscher, Chelsey et al. (2009) General and target-specific RNA binding properties of Epstein-Barr virus SM posttranscriptional regulatory protein. J Virol 83:11635-44

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