This laboratory has discovered four folate binding proteins (FBPs) which are enzymes that carry out previously unknown functions of the folate coenzymes. One is glycine N-methyltransferase (GNMT), an enzyme which catalyzes the methylation of glycine by S-adenosylmethionine (SAM) to form sarcosine and S-adenosylhomocysteine (SAH). Native GNMT contains bound 5- methyltetrahydrofolate (5-CH3-THF) as an allosteric inhibitor. It has been proposed that GNMT controls SAM levels in the cell by linking transmethylation to the de novo synthesis of methyl groups. Rats fed methyl deficient diets have a high incidence of spontaneous liver cancer. The proposed role for GNMT predicted that its activity should be decreased in animals fed these diets. Previous studies showed that GNMT activity was indeed lower as predicted and that total liver folate was also markedly (75%) lower, but the reasons for these changes were inconclusive.
One aim of the folate coenzymes. Two other aims will investigate the mechanism of the reduced GNMT activity using whole animals and hepatocytes. GNMT is also very abundant in pancreatic acini. Pancreatic GNMT has tightly bound folate suggesting that methylation may play an important role in acinar cell function. This is consistent with the well recognized inhibition of pancreatic secretion by ethionine, a specific inhibitor of biological methylation. A fourth specific aim is thus to characterize pancreatic GNMT and identify the site at which ethionine blocks the stimulus-secretion pathway of the pancreas. One of the cytosolic FBPs is the bifunctional enzyme 10-formyl-THF dehydrogenase/hydrolase. Recently the bifunctional nature of the enzyme was challenged by contaminant. The fifth specific aim is to clone the cDNA for 10-formyl-THF dehydrogenase/hydrolase. Recently the bifunctional nature of the enzyme was challenged by studies which found only dehydrogenase activity; hydrolase activity being ascribed to a contaminant. The fifth specific aim is to clone the cDNA for 10-formyl-THF dehydrogenase/hydrolase and express the protein in high yield. This will permit the absolute determination of whether the enzyme has one or both activities. Previous work has shown that native GNMT contains two moles of phosphate per tetramer and that phosphorylation by cAMP-dependent protein kinase increases GNMT activity. The last specific aim will be to clone the cDNA for GNMT and express it in a bacterial system to provide a source of unphosphorylated enzyme.

Agency
National Institute of Health (NIH)
Institute
National Institute of Diabetes and Digestive and Kidney Diseases (NIDDK)
Type
Research Project (R01)
Project #
5R01DK015289-18
Application #
3225358
Study Section
Nutrition Study Section (NTN)
Project Start
1978-01-01
Project End
1995-06-30
Budget Start
1993-07-01
Budget End
1994-06-30
Support Year
18
Fiscal Year
1993
Total Cost
Indirect Cost
Name
Vanderbilt University Medical Center
Department
Type
Schools of Medicine
DUNS #
004413456
City
Nashville
State
TN
Country
United States
Zip Code
37212
Garcia, Benjamin A; Luka, Zigmund; Loukachevitch, Lioudmila V et al. (2016) Folate deficiency affects histone methylation. Med Hypotheses 88:63-7
Hirschi, Alexander; Martin, William J; Luka, Zigmund et al. (2016) G-quadruplex RNA binding and recognition by the lysine-specific histone demethylase-1 enzyme. RNA 22:1250-60
Shrubsole, Martha J; Wagner, Conrad; Zhu, Xiangzhu et al. (2015) Associations between S-adenosylmethionine, S-adenosylhomocysteine, and colorectal adenoma risk are modified by sex. Am J Cancer Res 5:458-65
Luka, Zigmund; Pakhomova, Svetlana; Loukachevitch, Lioudmila V et al. (2014) Folate in demethylation: the crystal structure of the rat dimethylglycine dehydrogenase complexed with tetrahydrofolate. Biochem Biophys Res Commun 449:392-8
Luka, Zigmund; Pakhomova, Svetlana; Loukachevitch, Lioudmila V et al. (2014) Crystal structure of the histone lysine specific demethylase LSD1 complexed with tetrahydrofolate. Protein Sci 23:993-8
Carrasco, Manuel; Rabaneda, Luis G; Murillo-Carretero, Maribel et al. (2014) Glycine N-methyltransferase expression in the hippocampus and its role in neurogenesis and cognitive performance. Hippocampus 24:840-52
Martínez-Uña, Maite; Varela-Rey, Marta; Cano, Ainara et al. (2013) Excess S-adenosylmethionine reroutes phosphatidylethanolamine towards phosphatidylcholine and triglyceride synthesis. Hepatology 58:1296-305
Luka, Zigmund; Pakhomova, Svetlana; Loukachevitch, Lioudmila V et al. (2012) Differences in folate-protein interactions result in differing inhibition of native rat liver and recombinant glycine N-methyltransferase by 5-methyltetrahydrofolate. Biochim Biophys Acta 1824:286-91
Martínez-López, Nuria; García-Rodríguez, Juan L; Varela-Rey, Marta et al. (2012) Hepatoma cells from mice deficient in glycine N-methyltransferase have increased RAS signaling and activation of liver kinase B1. Gastroenterology 143:787-798.e13
Mudd, S Harvey; Wagner, Conrad; Luka, Zigmund et al. (2012) Two patients with hepatic mtDNA depletion syndromes and marked elevations of S-adenosylmethionine and methionine. Mol Genet Metab 105:228-36

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