The general long-term goal of this program involving heme proteins is to attain a molecular understanding of the mechanisms by which the associated polypeptides interact with a common heme group to produce the remarkable functional diversity which characterizes this class of proteins. The essential strategy is to apply powerful spectroscopic probes such as resonance Raman and time-resolved resonance Raman to the native and systematically manipulated proteins in order to reveal the structural and dynamic interactions which regulate heme reactivity. Recently developed methodology now allows several fundamentally important questions to be approached. For example, isotope sensitivity of molecular vibrations is exploited to selectively probe individual sites in functioning native hemoglobin and in rational site specific mutants to reveal a better understanding of allosteric cooperativity. Also, application of novel rapid-mixing techniques, coupled with available site-specific mutants will facilitate a thorough investigation of the active site structure of previously inaccessible catalytic intermediates of important oxidative heme enzymes such as cytochrome P450 and various peroxidases.

Agency
National Institute of Health (NIH)
Institute
National Institute of Diabetes and Digestive and Kidney Diseases (NIDDK)
Type
Research Project (R01)
Project #
5R01DK035153-13
Application #
2905323
Study Section
Metallobiochemistry Study Section (BMT)
Program Officer
Sechi, Salvatore
Project Start
1984-07-01
Project End
2000-06-30
Budget Start
1999-06-01
Budget End
2000-06-30
Support Year
13
Fiscal Year
1999
Total Cost
Indirect Cost
Name
Marquette University
Department
Chemistry
Type
Schools of Arts and Sciences
DUNS #
046929621
City
Milwaukee
State
WI
Country
United States
Zip Code
53201
Mak, Piotr J; Denisov, Ilia G; Grinkova, Yelena V et al. (2011) Defining CYP3A4 structural responses to substrate binding. Raman spectroscopic studies of a nanodisc-incorporated mammalian cytochrome P450. J Am Chem Soc 133:1357-66
Mak, Piotr J; Zhang, Haoming; Hollenberg, Paul F et al. (2010) Defining the structural consequences of mechanism-based inactivation of mammalian cytochrome P450 2B4 using resonance Raman spectroscopy. J Am Chem Soc 132:1494-5
Balakrishnan, Gurusamy; Ibrahim, Mohammed; Mak, Piotr J et al. (2009) Linking conformation change to hemoglobin activation via chain-selective time-resolved resonance Raman spectroscopy of protoheme/mesoheme hybrids. J Biol Inorg Chem 14:741-50
Balakrishnan, Gurusamy; Zhao, Xiaojie; Podstawska, Edyta et al. (2009) Subunit-selective interrogation of CO recombination in carbonmonoxy hemoglobin by isotope-edited time-resolved resonance Raman spectroscopy. Biochemistry 48:3120-6
Rwere, Freeborn; Mak, Piotr J; Kincaid, James R (2008) Resonance Raman interrogation of the consequences of heme rotational disorder in myoglobin and its ligated derivatives. Biochemistry 47:12869-77
Denisov, Ilia G; Mak, Piotr J; Makris, Thomas M et al. (2008) Resonance Raman characterization of the peroxo and hydroperoxo intermediates in cytochrome P450. J Phys Chem A 112:13172-9
Mak, Piotr J; Kincaid, James R (2008) Resonance Raman spectroscopic studies of hydroperoxo derivatives of cobalt-substituted myoglobin. J Inorg Biochem 102:1952-7
Mak, Piotr J; Kaluka, Daniel; Manyumwa, Munyaradzi Edith et al. (2008) Defining resonance Raman spectral responses to substrate binding by cytochrome P450 from Pseudomonas putida. Biopolymers 89:1045-53
Mak, Piotr J; Im, Sang-Choul; Zhang, Haoming et al. (2008) Resonance Raman studies of cytochrome P450 2B4 in its interactions with substrates and redox partners. Biochemistry 47:3950-63
Mak, Piotr J; Denisov, Ilia G; Victoria, Doreen et al. (2007) Resonance Raman detection of the hydroperoxo intermediate in the cytochrome P450 enzymatic cycle. J Am Chem Soc 129:6382-3

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