A growing body of epidemiological data suggests that chronic inflammation and infection induce malignant cell transformations and thus play a critical role in the etiology of human cancers. The overproduction of radicals (carbonate, nitrogen dioxide, superoxide radicals) in response to chronic infection and cellular inflammation is accompanied by the reactions of these radicals with polyunsaturated fatty acids (PUFA) in lipid membranes that generate highly reactive, genotoxic oxyl intermediates (peroxyl and alkoxyl radicals). In turn, these radicals contribute to oxidative DNA damage that contributes to the etiology of cancer by poorly defined pathways. Guanine is the most easily oxidizable nucleic acid base in DNA and is therefore a primary target of attack of reactive radical species. The guanine radicals formed undergo a cascade of reactions that culminate in the formation of stable and unstable, genotoxic chemical end-products. However, the reaction pathways, particularly the mechanisms of reaction of peroxyl and alkoxyl radicals with DNA are poorly understood. We have developed new approaches for studying in real time the reactions of unstable nucleobase radicals in DNA with reactive intermediates such as the peroxyl and alkoxyl radicals derived from lipid peroxidation, in aqueous solutions. The analysis of intermediate and final reaction products by a complex of analytical methods including HPLC, MALDI-TOF/MS, and HPLC-ESI-MS/MS, will provide insights into the mechanism of DNA reaction and oxidation pathways.
In specific Aim 1, the mechanisms of radical-radical reactions of PUFA peroxyl radicals and guanine radicals in DNA will be investigated.
In specific Aim 2, the further oxidation initiated by PUFA peroxyl radicals of 8-oxoguanine, a ubiquitous and well known form of cellular oxidative DNA damage, will be assessed.
In specific Aim 3, the detailed mechanisms of the still poorly understood oxidation pathways of PUFA molecules with reactive oxygen species (carbonate radical anion, nitrogen dioxide, superoxide radicals) will be investigated. The development of a variety of cancers including hepatocellular carcinoma, prostate cancer, pancreatic cancer, renal cell carcinoma, and colon cancer, have been correlated with chronic inflammation and infection. A better understanding of the oxidative lipid peroxidation pathways of DNA damage should provide a rational basis for the development of new strategies for the prevention and/or progression of these types of malignancies. ? ? ?

Agency
National Institute of Health (NIH)
Institute
National Institute of Environmental Health Sciences (NIEHS)
Type
Research Project (R01)
Project #
2R01ES011589-05
Application #
7095749
Study Section
Cancer Etiology Study Section (CE)
Program Officer
Mcallister, Kimberly A
Project Start
2002-04-01
Project End
2010-02-28
Budget Start
2006-06-01
Budget End
2007-02-28
Support Year
5
Fiscal Year
2006
Total Cost
$298,156
Indirect Cost
Name
New York University
Department
Chemistry
Type
Schools of Arts and Sciences
DUNS #
041968306
City
New York
State
NY
Country
United States
Zip Code
10012
Merta, Tomasz J; Geacintov, Nicholas E; Shafirovich, Vladimir (2018) Generation of 8-oxo-7,8-dihydroguanine in G-Quadruplexes Models of Human Telomere Sequences by One-electron Oxidation. Photochem Photobiol :
Lee, Young-Ae; Lee, Yuan-Cho; Geacintov, Nicholas E et al. (2016) Translesion synthesis past guanine(C8)-thymine(N3) intrastrand cross-links catalyzed by selected A- and Y-family polymerases. Mol Biosyst 12:1892-900
Shafirovich, Vladimir; Kropachev, Konstantin; Anderson, Thomas et al. (2016) Base and Nucleotide Excision Repair of Oxidatively Generated Guanine Lesions in DNA. J Biol Chem 291:5309-19
Cai, Yuqin; Kropachev, Konstantin; Terzidis, Michael A et al. (2015) Differences in the Access of Lesions to the Nucleotide Excision Repair Machinery in Nucleosomes. Biochemistry 54:4181-5
Talhaoui, Ibtissam; Shafirovich, Vladimir; Liu, Zhi et al. (2015) Oxidatively Generated Guanine(C8)-Thymine(N3) Intrastrand Cross-links in Double-stranded DNA Are Repaired by Base Excision Repair Pathways. J Biol Chem 290:14610-7
Uvaydov, Yuriy; Geacintov, Nicholas E; Shafirovich, Vladimir (2014) Generation of guanine-amino acid cross-links by a free radical combination mechanism. Phys Chem Chem Phys 16:11729-36
Rokhlenko, Yekaterina; Cadet, Jean; Geacintov, Nicholas E et al. (2014) Mechanistic aspects of hydration of guanine radical cations in DNA. J Am Chem Soc 136:5956-62
Cadet, Jean; Wagner, J Richard; Shafirovich, Vladimir et al. (2014) One-electron oxidation reactions of purine and pyrimidine bases in cellular DNA. Int J Radiat Biol 90:423-32
Kropachev, Konstantin; Ding, Shuang; Terzidis, Michael A et al. (2014) Structural basis for the recognition of diastereomeric 5',8-cyclo-2'-deoxypurine lesions by the human nucleotide excision repair system. Nucleic Acids Res 42:5020-32
Madugundu, Guru S; Wagner, J Richard; Cadet, Jean et al. (2013) Generation of Guanine-Thymine Cross-Links in Human Cells by One-Electron Oxidation Mechanisms. Chem Res Toxicol :

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