EXCEED THE SPACE PROVIDED. I he long-term goal ot this research program is to elucidate molecular mecnamsms or function and regulation of rod and cone cGMP-phosphodiesterases (PDE6). Rod and cone PDE6 serve as key effector enzymes in the vertebrate visual transduction cascade. Transducin activates PDE6 by relieving the inhibition imposed on the PDE6 catalytic dimer by two y-subunits (Py). Activated PDE6 hydrolyzes cGMP with a uniquely high catalytic rate. To study the structure-and- function relationships of PDE6 we have developed a system for expression of PDE6a'/PDE5 chimeras in insect cells. A chimeric PDE6/PDE5 enzyme maximally equivalent to PDE6 will be generated through a progressive incorporation of PDE6 sequence into existing functional PDE6/PDE5 chimeras. Mutational analysis of the PDE6-like chimeric enzymes guided by the model of PDE6 catalytic domain will be carried out to identify the structural elements of PDE6 critical for the efficient hydrolysis of cGMP and the enzyme sensitivity to selective competitive inhibitors. PDE6 catalytic subunits contain two N-terminal GAP domains, GAFa and GAFb, implicated in noncatalytic binding of cGMP. We have found that the polycationic region of Py binds to the GAFa domains of PDE6. We hypothesize that a direct stabilization of the cGMP-binding pocket by Py is the mechanism for known positive cooperativity between Py and noncatalytic cGMP binding. To test this hypothesis, Py contact residues within the GAFa domain of PDE6 will be identified by mutagenesis. The GAF domains and residues involved in the noncatalytic cGMP-binding will be identified by substituting selected residues within potential cGMP-pockets of PDE6. Models of PDE6 GAF domains will be utilized to elucidate the nature of the reciprocal relationship between the cGMP and Py-binding sites. Rod PDE6 catalytic a and p subunits form indissociable ap heterodimers, whereas cone PDE6 a' subunit forms a'a'homodimers. Although the GAF domains of PDE6, are thought to be involved in the dimerization, the PDE6 intersubunit interface has not been investigated. Sites and residues responsible for the specific dimerization of PDE6 will be identified through the analysis of dimer formation between chimeric and mutant PDEs. The role of specific PDE6 residues will be established by inducing homodimerization between mutant GAF domains of PDE6 a and p. The map of PDEa/p-Py interactions indicates two possible types of assembly of PDE6. A Py molecule may bind to GAFa and the catalytic site from the same or different subunits of the catalytic dimer. The assembly of PDE6 subunits will be tested using a cross-linking approach. These studies will advance our understanding of the structure, function, and regulation of PDE6, and help to elucidate the mechanisms of retinal degeneration caused by mutations of PDE6 genes. PERFORMANCE SITE ========================================Section End===========================================

Agency
National Institute of Health (NIH)
Institute
National Eye Institute (NEI)
Type
Research Project (R01)
Project #
5R01EY010843-12
Application #
6838753
Study Section
Special Emphasis Panel (ZRG1-VISC (01))
Program Officer
Mariani, Andrew P
Project Start
1995-01-01
Project End
2007-12-31
Budget Start
2005-01-01
Budget End
2005-12-31
Support Year
12
Fiscal Year
2005
Total Cost
$331,875
Indirect Cost
Name
University of Iowa
Department
Physiology
Type
Schools of Medicine
DUNS #
062761671
City
Iowa City
State
IA
Country
United States
Zip Code
52242
Yu, Liping; Yadav, Ravi P; Artemyev, Nikolai O (2018) NMR resonance assignments of the TPR domain of human aryl hydrocarbon receptor-interacting protein-like 1 (AIPL1). Biomol NMR Assign :
Wang, Tian; Reingruber, Jürgen; Woodruff, Michael L et al. (2018) The PDE6 mutation in the rd10 retinal degeneration mouse model causes protein mislocalization and instability and promotes cell death through increased ion influx. J Biol Chem 293:15332-15346
Pahlberg, Johan; Majumder, Anurima; Artemyev, Nikolai O (2018) Ex Vivo Functional Evaluation of Synaptic Transmission from Rods to Rod Bipolar Cells in Mice. Methods Mol Biol 1753:203-216
Yadav, Ravi P; Gakhar, Lokesh; Yu, Liping et al. (2017) Unique structural features of the AIPL1-FKBP domain that support prenyl lipid binding and underlie protein malfunction in blindness. Proc Natl Acad Sci U S A 114:E6536-E6545
Gopalakrishna, Kota N; Boyd, Kimberly; Artemyev, Nikolai O (2017) Mechanisms of mutant PDE6 proteins underlying retinal diseases. Cell Signal 37:74-80
Yadav, Ravi P; Artemyev, Nikolai O (2017) AIPL1: A specialized chaperone for the phototransduction effector. Cell Signal 40:183-189
Yu, Liping; Yadav, Ravi P; Artemyev, Nikolai O (2017) NMR resonance assignments of the FKBP domain of human aryl hydrocarbon receptor-interacting protein-like 1 (AIPL1) in complex with a farnesyl ligand. Biomol NMR Assign 11:111-115
Gopalakrishna, Kota N; Boyd, Kimberly; Yadav, Ravi P et al. (2016) Aryl Hydrocarbon Receptor-interacting Protein-like 1 Is an Obligate Chaperone of Phosphodiesterase 6 and Is Assisted by the ?-Subunit of Its Client. J Biol Chem 291:16282-91
Yadav, Ravi P; Majumder, Anurima; Gakhar, Lokesh et al. (2015) Extended conformation of the proline-rich domain of human aryl hydrocarbon receptor-interacting protein-like 1: implications for retina disease. J Neurochem 135:165-75
Majumder, Anurima; Pahlberg, Johan; Muradov, Hakim et al. (2015) Exchange of Cone for Rod Phosphodiesterase 6 Catalytic Subunits in Rod Photoreceptors Mimics in Part Features of Light Adaptation. J Neurosci 35:9225-35

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