The long-range goal of this application is to study the structure and function of several periplasmic binding or receptor proteins. These proteins are essential components of osmotic shock-sensitive active transport and chemotaxis in bacteria. X-ray crystallography will be used primarily to ahcieve this goal. This goal is imminently possible since we have obtained single crystals of five receptor proteins specific for arabinose-, D-galactose-, maltose-, leucine/isoleucine/valine-, and sulfate-binding proteins. Furthermore, the crystal structure of the arabinose-binding protein has been solved at 2.4. A resolution and the analysis of other binding proteins are already in progress. The same technique will be utilized to determine in detail the stereochemistry of ligand binding to these binding proteins. Conformational changes attendant to binding, postulated to be essential in translocation and an obligatory first step in transmission of signals during chemotactic behavior, can be elucidated in dtail by this analysis. We will also employ stopped-flow rapid mixing and small angle x-ray scattering techniques to further study the liganded state of the various receptor proteins. Results of this study will from a major basis for a molecular understanding of the role of binding proteins in transport and chemotaxis, two important cellular processes. Transport processes perform a vital function in the life of the cell by maintaining a relative constancy of the environment within the cell and regulating the entrance and exist of various substances necessary for metabolic activity. In addition, chemotaxis is important for the survival of the microorgnisms since interaction with the environment depends largely on the ability to respond to stimuli. Taxis of cells from higher organisms is important for fertilization and biological defense mechanisms. Further, the principle of single processing and transmission of information in bacteria is similar in a wide variety of sensory systems. Therefore, detailed understanding of these processes in a relatively simple system will allow evaluation of similar process and principles in higher organisms.

Agency
National Institute of Health (NIH)
Institute
National Institute of General Medical Sciences (NIGMS)
Type
Research Project (R01)
Project #
5R01GM021371-11
Application #
3270450
Study Section
Biophysics and Biophysical Chemistry B Study Section (BBCB)
Project Start
1977-12-01
Project End
1986-11-30
Budget Start
1984-12-01
Budget End
1985-11-30
Support Year
11
Fiscal Year
1985
Total Cost
Indirect Cost
Name
Rice University
Department
Type
Schools of Arts and Sciences
DUNS #
050299031
City
Houston
State
TX
Country
United States
Zip Code
77005
Halling, D Brent; Georgiou, Dimitra K; Black, D J et al. (2009) Determinants in CaV1 channels that regulate the Ca2+ sensitivity of bound calmodulin. J Biol Chem 284:20041-51
Fallon, Jennifer L; Halling, D Brent; Hamilton, Susan L et al. (2005) Structure of calmodulin bound to the hydrophobic IQ domain of the cardiac Ca(v)1.2 calcium channel. Structure 13:1881-6
Vyas, Nand K; Vyas, Meenakshi N; Quiocho, Florante A (2003) Crystal structure of M tuberculosis ABC phosphate transport receptor: specificity and charge compensation dominated by ion-dipole interactions. Structure 11:765-74
Vyas, Nand K; Vyas, Meenakshi N; Chervenak, Mary C et al. (2002) Molecular recognition of oligosaccharide epitopes by a monoclonal Fab specific for Shigella flexneri Y lipopolysaccharide: X-ray structures and thermodynamics. Biochemistry 41:13575-86
Duan, X; Hall, J A; Nikaido, H et al. (2001) Crystal structures of the maltodextrin/maltose-binding protein complexed with reduced oligosaccharides: flexibility of tertiary structure and ligand binding. J Mol Biol 306:1115-26
Chen, J; Sharma, S; Quiocho, F A et al. (2001) Trapping the transition state of an ATP-binding cassette transporter: evidence for a concerted mechanism of maltose transport. Proc Natl Acad Sci U S A 98:1525-30
Thomson, J; Liu, Y; Sturtevant, J M et al. (1998) A thermodynamic study of the binding of linear and cyclic oligosaccharides to the maltodextrin-binding protein of Escherichia coli. Biophys Chem 70:101-8
Ledvina, P S; Tsai, A L; Wang, Z et al. (1998) Dominant role of local dipolar interactions in phosphate binding to a receptor cleft with an electronegative charge surface: equilibrium, kinetic, and crystallographic studies. Protein Sci 7:2550-9
Yao, N; Ledvina, P S; Choudhary, A et al. (1996) Modulation of a salt link does not affect binding of phosphate to its specific active transport receptor. Biochemistry 35:2079-85
Vyas, M N; Vyas, N K; Meikle, P J et al. (1993) Preliminary crystallographic analysis of a Fab specific for the O-antigen of Shigella flexneri cell surface lipopolysaccharide with and without bound saccharides. J Mol Biol 231:133-6

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