The long range goal of this proposal is to provide a more thorough understanding of the regulatory mechanisms involved in the biosynthesis and processing of the glycans found covalently attached to glycoproteins. Most proteins secreted from the cell or destined to become membrane components are glycoproteins. Failure to properly synthesize, traffic or catabolize the carbohydrates on glycoproteins causes numerous disease states leading to mental retardation, failure of reproductive hormonal control and immunological disorders leading to susceptibility to severe infection. Receptor targeting and transmembrane signaling cascades of many glycoproteins are mediated through their attendant carbohydrates. Influenza and AIDS virus uptake is mediated through carbohydrates, and cell surface glycans are altered in cancer. Clearly, understanding the fundamental control mechanisms that underlie correct glycoprotein metabolism is seminal to identifying and intervening in numerous glycopathologies. The current application proposes in four Aims studies in the small eukaryotes Saccharomyces cerevisiae and schizosaccharomyces pombe to determine the extent to which the substrate specificity of glycan processing enzymes or their subcompartmentation in elements of the secretory pathway govern glycan modeling in yeast.
The first Aim will characterize the enzymology of steps in S. cerevisiae required for the correct synthesis of Glc3Man9GlcNAc2-PP-dolichol, the precursor of initial N-glycan synthesis in the endoplasmic reticulum.
The second Aim will determine the aberrant N-linked oligosaccharide structures on a probe glycoprotein, secreted invertase, from S. cerevisiae pmrl mutant that, because of a defective Ca2+-ATPase, mistargets secretory components in vivo.
The third Aim will continue studies to define N- and O-. linked oligosaccharide structures in wild-type and five mutant S. pombe strains that have defects in sugartransferases.
The fourth Aim will examine the effect on normal glycoprotein metabolism of expressing a S. cerevisiae alpha1,3-mannosyltransferase in S. pombe, which does not have this enzyme activity. N-linked oligosaccharides are released from glycoproteins with endo-Beta-N-acetylglucosaminidase H and O-linked glycans by Beta- elimination and then purified by size on Bio-Gel P4. Glycan isomers are separated by Dionex high-pH anion-exchange chromatography and structurally defined by 1H-NMR spectroscopy and chemical and enzymatic methods as needed. The localization studies in Aims two and four will involve subcellular fractionation and immunofluorescence microscopy.

Agency
National Institute of Health (NIH)
Institute
National Institute of General Medical Sciences (NIGMS)
Type
Research Project (R01)
Project #
5R01GM023900-22
Application #
2910057
Study Section
Physiological Chemistry Study Section (PC)
Project Start
1977-09-09
Project End
2000-04-30
Budget Start
1999-05-01
Budget End
2000-04-30
Support Year
22
Fiscal Year
1999
Total Cost
Indirect Cost
Name
Wadsworth Center
Department
Type
DUNS #
110521739
City
Menands
State
NY
Country
United States
Zip Code
12204
Trimble, Robert B; Lubowski, Catherine; Hauer 3rd, Charles R et al. (2004) Characterization of N- and O-linked glycosylation of recombinant human bile salt-stimulated lipase secreted by Pichia pastoris. Glycobiology 14:265-74
Andreishcheva, Ekaterina N; Kunkel, Jeremy P; Gemmill, Trent R et al. (2004) Five genes involved in biosynthesis of the pyruvylated Galbeta1,3-epitope in Schizosaccharomyces pombe N-linked glycans. J Biol Chem 279:35644-55
Cipollo, John F; Trimble, Robert B (2002) Hypoglycosylation in the alg12delta yeast mutant destabilizes protease A and causes proteolytic loss of external invertase. Glycobiology 12:30G-3G
Cipollo, John F; Trimble, Robert B (2002) The Saccharomyces cerevisiae alg12delta mutant reveals a role for the middle-arm alpha1,2Man- and upper-arm alpha1,2Manalpha1,6Man- residues of Glc3Man9GlcNAc2-PP-Dol in regulating glycoprotein glycan processing in the endoplasmic reticulum and Golgi appa Glycobiology 12:749-62
Cipollo, J F; Trimble, R B; Chi, J H et al. (2001) The yeast ALG11 gene specifies addition of the terminal alpha 1,2-Man to the Man5GlcNAc2-PP-dolichol N-glycosylation intermediate formed on the cytosolic side of the endoplasmic reticulum. J Biol Chem 276:21828-40
Cipollo, J F; Trimble, R B (2000) The accumulation of Man(6)GlcNAc(2)-PP-dolichol in the Saccharomyces cerevisiae Deltaalg9 mutant reveals a regulatory role for the Alg3p alpha1,3-Man middle-arm addition in downstream oligosaccharide-lipid and glycoprotein glycan processing. J Biol Chem 275:4267-77
Cipollo, J F; Trimble, R B; Rance, M et al. (2000) Two-dimensional relayed-rotating-frame overhauser spectroscopy (1)H NMR experiments for the selective identification of 1,2-glycosidic linkages in polysaccharides. Anal Biochem 278:52-8
Verostek, M F; Lubowski, C; Trimble, R B (2000) Selective organic precipitation/extraction of released N-glycans following large-scale enzymatic deglycosylation of glycoproteins. Anal Biochem 278:111-22
Gemmill, T R; Trimble, R B (1999) Schizosaccharomyces pombe produces novel Gal0-2Man1-3 O-linked oligosaccharides. Glycobiology 9:507-15
Gemmill, T R; Trimble, R B (1999) Overview of N- and O-linked oligosaccharide structures found in various yeast species. Biochim Biophys Acta 1426:227-37

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