Flavoproteins catalyze many biologically important electron- transfer reactions. We have developed and used a spectroelectrochemical method to systematically study the thermodynamic properties of two flavoprotein groups, the oxidases and the dehydrogenases. We plan to finish the characterization of the three main groups of flavoproteins by studying the monooxygenases, and we propose to extensively study the ligand binding properties of the flavoprotein dehydrogenase enzymes involved in the beta-oxidation of fatty acids. A parallel study will be performed on ligand binding to the monooxygenases. The beta-oxidation of fatty acids is an important energy conversion process in heart muscle, skeletal muscle, liver and kidney. It is the primary energy source for heart muscle, providing 90% of this energy. The beta-oxidation process is regulated by the acyl-CoA dehydrogenases (ACD), which catalyze the first step. It has been postulated that the ACD's are isopotential with their substrates and that product binding controls the completeness of the reaction. Using enzymes from a bacterial source we have shown that the substrate is not isopotential with the enzyme and that the binding of the substrate or product to the reduced form has shifted the potential significantly positive. A similar shift would be of more significance in a mammalian system. Work done by others suggests that such shifts are occurring. This work taken together strongly suggests that for the mammalian system, substrate-bound ACD is isopotential with electron transferring flavoprotein (ETF) and with ETF-ubiquinone oxidoreductase. This suggestion has profound implications on the energetics of the beta-oxidation process. This work suggests that a further redox study will give new inisights into regulation (and inhibition) of oxidation.
Our aims are to measure the electron energy levels (redox potentials) of free enzymes and substrates, then to measure the effect of ligand binding on those levels. Thus, we will be able to assess the relative importance of binding in controlling catalytic reactions. Electrochemistry is the best method to examine these interactions because we can clearly show that electron-energy levels change in a measurable way upon ligand binding. We will perform a comparative study of acyl-CoA dehydrogenases, from mitochondria, bacteria which are mitochondrial precursors and anaerobic bacteria bound to substrates, products, inhibitors, and their respective ETF's.

Agency
National Institute of Health (NIH)
Institute
National Institute of General Medical Sciences (NIGMS)
Type
Research Project (R01)
Project #
5R01GM029344-10
Application #
3276908
Study Section
Biochemistry Study Section (BIO)
Project Start
1981-07-01
Project End
1992-12-31
Budget Start
1991-01-01
Budget End
1991-12-31
Support Year
10
Fiscal Year
1991
Total Cost
Indirect Cost
Name
University of Minnesota Twin Cities
Department
Type
Other Domestic Higher Education
DUNS #
168559177
City
Minneapolis
State
MN
Country
United States
Zip Code
55455
Bhattacharyya, Sudeep; Stankovich, Marian T; Truhlar, Donald G et al. (2007) Combined quantum mechanical and molecular mechanical simulations of one- and two-electron reduction potentials of flavin cofactor in water, medium-chain acyl-CoA dehydrogenase, and cholesterol oxidase. J Phys Chem A 111:5729-42
Saenger, Amy K; Nguyen, Tien V; Vockley, Jerry et al. (2005) Biochemical and electrochemical characterization of two variant human short-chain acyl-CoA dehydrogenases. Biochemistry 44:16035-42
Bhattacharyya, Sudeep; Ma, Shuhua; Stankovich, Marian T et al. (2005) Potential of mean force calculation for the proton and hydride transfer reactions catalyzed by medium-chain acyl-CoA dehydrogenase: effect of mutations on enzyme catalysis. Biochemistry 44:16549-62
Saenger, Amy K; Nguyen, Tien V; Vockley, Jerry et al. (2005) Thermodynamic regulation of human short-chain acyl-CoA dehydrogenase by substrate and product binding. Biochemistry 44:16043-53
Zlateva, Theodora; Quaroni, Luca; Que, Lawrence et al. (2004) Redox studies of subunit interactivity in aerobic ribonucleotide reductase from Escherichia coli. J Biol Chem 279:18742-7
Wu, Jiaquan; Bell, Alasdair F; Luo, Lian et al. (2003) Probing hydrogen-bonding interactions in the active site of medium-chain acyl-CoA dehydrogenase using Raman spectroscopy. Biochemistry 42:11846-56
Lamm, Teresa R; Kohls, Theresa D; Saenger, Amy K et al. (2003) Comparison of ligand polarization and enzyme activation in medium- and short-chain acyl-coenzyme A dehydrogenase-novel analog complexes. Arch Biochem Biophys 409:251-61
Lamm, Teresa R; Kohls, Theresa D; Stankovich, Marian T (2002) Activation of substrate/product couples by medium-chain acyl-CoA dehydrogenase. Arch Biochem Biophys 404:136-46
Pellett, J D; Becker, D F; Saenger, A K et al. (2001) Role of aromatic stacking interactions in the modulation of the two-electron reduction potentials of flavin and substrate/product in Megasphaera elsdenii short-chain acyl-coenzyme A dehydrogenase. Biochemistry 40:7720-8
Pellett, J D; Sabaj, K M; Stephens, A W et al. (2000) Medium-chain acyl-coenzyme A dehydrogenase bound to a product analogue, hexadienoyl-coenzyme A: effects on reduction potential, pK(a), and polarization. Biochemistry 39:13982-92

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