) Many enzymes, including those of lipid metabolism, have evolved to access their substrates at the interface, and processively carry out the catalytic turnover at the interfaces of micelles or bilayer membrane. For example, a dozen different phospholipase A2 (PLA21) in human tissues act on phospholipids of membranes. The products and their eicosanoid metabolites signal and regulate a wide range of signaling, secretory, and inflammatory processes. We have established protocols for the interfacial kinetic analysis of PLA2. The challenge is to dissect the interfacial catalytic turnover events from other processes that influence the microscopic steady state condition for the ensemble-averaging. Dissection of the binding of the enzyme to the interface from the interfacial catalytic turnover events permits determination of the primary rate, equilibrium, and activation parameters. This approach has led to novel insights into the catalytic mechanism. Interfacial activation is dissected as increased substrate affinity of the enzyme at the interface (Ksstar-allostery), and the kcatstar activation is mediated by the anionic interface. Our next focus is to develop a structural basis for the allosteric interfacial activation. Our working model is that pancreatic PLA2 at the interface exists in two forms: the charge-compensated form at the anionic interface is catalytically active (EstarS)#, and the charge-sensitive form at the zwitterionic interface (EstarS) is impaired (Scheme II).
Specific aims of the proposed study include: (#1) To discern the role of Lys-l0 and Lys-62 and (#2) of the 63-66 loop in the PLA2 binding to the interface and the catalytic events. Mutants with a single Trp at 1, 10, 19,20, 31, 53, 56, 62 ,69, 73, 87, 115 or 120 will be prepared with the W3F and with or without the K53,56, 121M substitution to represent the charge-sensitive and the charge-compensated forms of pig pancreatic PLA2 (isoform IB). Both forms of the Trp-mutants will be characterized for (#3) the catalytic, activation, and binding parameters at the anionic versus zwitterionic interfaces, and also (#4) spectroscopically to ascertain the quencher accessibility of the single Trp-probe in different positions. Together, results of aims #1-4 will be used to identify the face of IB PLA2 (the i-face) that makes contact with the interface, and how this face differs at the anionic versus zwitterionic interfaces. (#5) The anion binding sites of PLA2 will be identified from the x-ray structure of the cocrystals with certain anions, such as sulfate and phosphate. (#6) Key results from these aims will be extended to other PLA2 isoforms and their site-directed mutant's. Thus the overall goal is to identify the residues at the i-face, identify the anion binding sites, characterize the tertiary structural and functional differences between the PLA2 isoforms. These results will provide insights into the structural basis for the functional differences between the coupling of the i-face with the active site events of the PLA2 family.

Agency
National Institute of Health (NIH)
Institute
National Institute of General Medical Sciences (NIGMS)
Type
Research Project (R01)
Project #
5R01GM029703-20
Application #
6706354
Study Section
Physical Biochemistry Study Section (PB)
Program Officer
Chin, Jean
Project Start
1983-04-01
Project End
2006-02-28
Budget Start
2004-03-01
Budget End
2006-02-28
Support Year
20
Fiscal Year
2004
Total Cost
$277,500
Indirect Cost
Name
University of Delaware
Department
Chemistry
Type
Schools of Arts and Sciences
DUNS #
059007500
City
Newark
State
DE
Country
United States
Zip Code
19716
Pan, Ying H; Bahnson, Brian J (2010) Structure of a premicellar complex of alkyl sulfates with the interfacial binding surfaces of four subunits of phospholipase A2. Biochim Biophys Acta 1804:1443-8
Pan, Ying H; Bahnson, Brian J (2007) Structural basis for bile salt inhibition of pancreatic phospholipase A2. J Mol Biol 369:439-50
Tsai, Yu-Cheng; Yu, Bao-Zhu; Wang, Yu-Zhen et al. (2006) Desolvation map of the i-face of phospholipase A2. Biochim Biophys Acta 1758:653-65
Yu, Bao-Zhu; Pan, Ying H; Janssen, Marcel J W et al. (2005) Kinetic and structural properties of disulfide engineered phospholipase A2: insight into the role of disulfide bonding patterns. Biochemistry 44:3369-79
Bahnson, Brian J (2005) Structure, function and interfacial allosterism in phospholipase A2: insight from the anion-assisted dimer. Arch Biochem Biophys 433:96-106
Yu, Bao-Zhu; Polenova, Tatyana; Jain, Mahendra Kumar et al. (2005) Premicellar complexes of sphingomyelinase mediate enzyme exchange for the stationary phase turnover. Biochim Biophys Acta 1712:137-51
Berg, Otto G; Yu, Bao-Zhu; Chang, Cherry et al. (2004) Cooperative binding of monodisperse anionic amphiphiles to the i-face: phospholipase A2-paradigm for interfacial binding. Biochemistry 43:7999-8013
Berg, Otto G; Yu, Bao-Zhu; Apitz-Castro, Rafael J et al. (2004) Phosphatidylinositol-specific phospholipase C forms different complexes with monodisperse and micellar phosphatidylcholine. Biochemistry 43:2080-90
Cajal, Yolanda; Berg, Otto G; Jain, Mahendra Kumar (2004) Origins of delays in monolayer kinetics: phospholipase A2 paradigm. Biochemistry 43:9256-64
Yu, Bao-Zhu; Apitz-Castro, Rafael; Tsai, Ming-Daw et al. (2003) Interaction of monodisperse anionic amphiphiles with the i-face of secreted phospholipase A2. Biochemistry 42:6293-301

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