The goal of this project is to facilitate the development and evaluation of statistical methods for identifying and characterizing the genetic contribution to complex diseases and their precursors and risk factors. We will pursue this goal by continuing the organization of the Genetic Analysis Workshops (GAWs), which began in 1982. The GAWs are a collaborative effort among genetic epidemiologists to evaluate and compare statistical genetic methods. For each GAW, topics are chosen for their relevance to current analytical issues in genetic epidemiology, and sets of real and computer-simulated data are distributed to investigators worldwide. Participants submit the results of their analyses, which are discussed and compared at a 2.5-day meeting. Before the Workshops, participants communicate with others who have done similar types of analyses and plan integrated presentations. The GAW submissions invariably contain new ideas for methods to handle complex phenotypes. Recent GAWs have included genome scan data and simulated sequence data, giving participants an opportunity to try out new methods for localizing disease-causing genes. GAW13 (to be held in 2002) will feature genetic analysis of longitudinal data from families in the Framingham Heart Study, together with multiple replicates of a simulated data set modeled after the Framingham data. GAW14 will be held in 2004 and GAW15 in 2006. All planning and data distribution for GAW16 will be essentially complete by the end of the requested period of support in 2008. We will continue to distribute real and simulated data from past GAWs and programs for genetic analysis. Long after each GAW is over, investigators continue to use real and simulated GAW data sets to evaluate new analytical methods and software, to estimate power and false positive rates, and to demonstrate the feasibility of statistical techniques for finding disease genes. GAW data also are extensively used in teaching and dissertation research.

Agency
National Institute of Health (NIH)
Institute
National Institute of General Medical Sciences (NIGMS)
Type
Research Project (R01)
Project #
2R01GM031575-21
Application #
6687934
Study Section
Epidemiology and Disease Control Subcommittee 2 (EDC)
Program Officer
Eckstrand, Irene A
Project Start
1983-04-01
Project End
2007-08-31
Budget Start
2003-09-01
Budget End
2004-08-31
Support Year
21
Fiscal Year
2003
Total Cost
$397,935
Indirect Cost
Name
Southwest Foundation for Biomedical Research
Department
Type
DUNS #
007936834
City
San Antonio
State
TX
Country
United States
Zip Code
78245
Lent, Samantha; Xu, Hanfei; Wang, Lan et al. (2018) Comparison of novel and existing methods for detecting differentially methylated regions. BMC Genet 19:84
Peralta, Juan M; Blackburn, Nicholas B; Porto, Arthur et al. (2018) Genome-wide linkage scan for loci influencing plasma triglyceride levels. BMC Proc 12:52
Gao, Tony Huayang; Zhang, Jianjun; Miguelangel, Diaz Medina et al. (2018) Methods to evaluate rare variants gene-age interaction for triglycerides. BMC Proc 12:49
Wang, Biqi; DeStefano, Anita L; Lin, Honghuang (2018) Integrative methylation score to identify epigenetic modifications associated with lipid changes resulting from fenofibrate treatment in families. BMC Proc 12:28
Fuady, Angga M; Lent, Samantha; Sarnowski, ChloƩ et al. (2018) Application of novel and existing methods to identify genes with evidence of epigenetic association: results from GAW20. BMC Genet 19:72
Blackburn, Nicholas B; Porto, Arthur; Peralta, Juan M et al. (2018) Heritability and genetic associations of triglyceride and HDL-C levels using pedigree-based and empirical kinships. BMC Proc 12:34
Yu, Jih-Chang; Hsu, Fang-Chi; Chiu, Yen-Feng (2018) Assessment of fenofibrate-methylation interactions on triglycerides using longitudinal family data. BMC Proc 12:48
Nustad, Haakon E; Almeida, Marcio; Canty, Angelo J et al. (2018) Epigenetics, heritability and longitudinal analysis. BMC Genet 19:77
Datta, Subha; Fang, Yixin; Loh, Ji Meng (2018) Joint screening of ultrahigh dimensional variables for family-based genetic studies. BMC Proc 12:24
Ghosh, Saurabh; Fardo, David W (2018) Association analyses of repeated measures on triglyceride and high-density lipoprotein levels: insights from GAW20. BMC Genet 19:73

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